Lepeophtheirus salmonis (salmon louse): 121127585
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Entry
121127585 CDS
T08214
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04517
IgSF CAM signaling
lsm04518
Integrin signaling
lsm04519
Cadherin signaling
lsm04820
Cytoskeleton in muscle cells
lsm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121127585
04518 Integrin signaling
121127585
04519 Cadherin signaling
121127585
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121127585
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121127585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsm04812
]
121127585
04147 Exosome [BR:
lsm04147
]
121127585
Cytoskeleton proteins [BR:
lsm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121127585
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121127585
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
GIT1_C
STX6_10_61_N
DUF1993
Chap-C
Motif
Other DBs
NCBI-GeneID:
121127585
NCBI-ProteinID:
XP_040578931
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All DBs
Position
13:complement(18166264..18232006)
Genome browser
AA seq
861 aa
AA seq
DB search
MPPMYQTQTIASILEPVAQQVSKLIILHEEGEDGNAMPDLEKPVQAVSDAVANLTRVGKD
TVNSSQDAKLKTEMPNALNSIECAANYLEKACRIMKHDPYSQEGRDQLITGSRGILQGTT
NMLLAFDQSQVRKICRDSKRILDYLAISEVIETMEDLVQYVKDLSPCLAKICKDIDGRRN
DLLNPYHRDSLAQNLEQIKTLAPILICSMKIFIQINGSDNKKGAEEAIENRNYLARRMTG
EIAEIVRVLEDSAVSGEEGIQQTTSTNQNHSILSVYSPLPLKGKSVADLSFQELVKKILN
DRSTPIDLKLLRRAVELGEKIGEGFDAGHVQADVLSLCNELKSSFGKDPMTIRKYLSDLE
NKIKEAVIDQIIQDMADIVTPIKLYCDSVNETNYQSLHRKREYADIRGQSLKIFANRLSK
TANIVSYFDNETQDKRRAEHLRYLGHQIQNLTPQIINAGTIKINYPDNRAAEENFENLTN
QFAEGIQNIRDICDETVNLNIFLRRTEEFIRRAIQNCESIIIHRDKGSSKVIIDNAAAAA
RLSNRLLLTLSREAENSEDPKLHSRVQSSGDRLKESLGPFLENSRVIATNLSALDRGFVA
AWRSATAKFLEAIAGVSRIFDEFNDNIDHSSQIPNNHFSSNMVPEEEDVPPPRPPPPDPR
TFSRAPPRLPIPHGCDTDDEEGLFSNEPAGNQPIHLAAHGLYQEIKQWDHSDNEIIAAAK
KIAYLMAHLSELIKGGKGTKKELIACAKGLADQSEKITELAKELAKHCTDKKIRVNLLQV
CEKIPTLGTQLRVLSTVKATMMGAKMDSEEDQQAMDILVFNAQKLNQAVKETVRAAESAS
IRVRSDAGFKLKWIRKQPWFQ
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaatgtatcaaacacaaacaatagcctcaattctagagcctgtggcacaacag
gtatcaaagctgatcattctacatgaggagggtgaggatgggaacgcaatgccggattta
gaaaaaccggttcaggccgttagtgatgccgtagccaacttgactagggttggaaaggat
actgttaattcatcacaggacgcaaagttaaagacagagatgccaaatgctctcaattca
attgaatgtgccgctaattatttggagaaagcatgtcgtataatgaaacatgatccctat
tcacaagaaggacgggatcaactcatcacaggatcaaggggtattctacaaggaacaacc
aatatgcttctagcttttgatcaatctcaggtccgaaagatttgcagagatagcaaacgg
atattagactacttggccattagtgaagtgattgagacaatggaggatttggttcagtat
gtaaaggatttgagcccttgtcttgccaagatttgtaaagatatagatgggagacgaaat
gatttgttaaatccatatcatagagactccttggcacaaaacctcgaacaaattaaaaca
ttagcacccattctcatttgctctatgaaaatttttattcaaatcaatggaagtgataat
aaaaaaggagcggaagaggcgatagaaaatagaaattatcttgcaagacgaatgactgga
gaaattgcagaaatagtgagagttcttgaagactctgctgtgagtggggaggaaggcatt
cagcaaacgacttcaaccaatcaaaaccattcaattttatcagtttattcgccccttcct
ctaaaaggaaaaagtgtagccgatctttcctttcaagaattagtcaaaaaaatattaaac
gatcgatctactccaattgatttaaaattactccgaagagcagttgaactgggagaaaaa
attggcgaaggatttgatgctggacacgttcaggcagacgttttatccttgtgcaatgag
ttaaaatcctcttttggaaaagatccgatgactatacggaaatacttatcagatctggaa
aataaaattaaagaagctgtcatagatcaaatcattcaagatatggctgatattgtaact
cctatcaagctctactgtgactctgtcaatgagacaaactatcagtctttacatcgtaag
agggaatacgctgacattagaggtcagtcactcaaaatttttgcaaatcgtttgtcaaaa
actgcgaatattgtgtcttattttgataatgaaactcaggataaacgtcgtgctgagcat
cttcgctatttaggacatcaaattcaaaaccttactcctcaaataataaatgcgggaact
attaaaattaactatccggataacagagctgcagaagagaactttgaaaatttgacgaat
cagtttgcagagggaatacaaaatattcgagatatatgcgatgaaaccgtgaatttaaat
atatttttaagaagaacagaagaatttatcagacgagcaattcagaattgtgagtctatc
atcattcatcgcgataaaggctcttcaaaggtcattattgacaatgctgcagctgctgcc
cgactgtcaaaccgtctacttttaacattgagccgtgaagcagaaaattccgaggatcca
aaacttcattcacgggttcaatcttctggagatcgtttaaaagaatctcttggtcccttt
ttggagaactcacgtgtcattgcaacaaatttatctgccttggatagaggctttgtagct
gcttggagatctgccactgctaaattccttgaagcaatagcaggtgtatcaaggatcttt
gatgaatttaatgataacatcgatcattcttcgcaaattcctaataaccatttttcgtca
aacatggtccctgaagaagaggatgtccctcccccacgacctcctcctccagatccaaga
accttttcaagggctccacctcgactaccaatacctcatggctgtgacactgatgatgaa
gaagggttgtttagcaatgagccagctggaaatcaacctattcatttggctgcacatgga
ttatatcaagaaatcaaacagtgggatcactcagacaatgaaataattgcagctgctaag
aaaatagcgtacttgatggcacatttatctgaactaataaaaggtggaaaaggaactaaa
aaggaattgatcgcctgtgccaaaggacttgcagatcaatccgaaaaaattacagaatta
gcaaaagaacttgcaaagcattgcacagataagaaaatacgagtcaatttgcttcaggtt
tgtgaaaagattccaacactgggaacgcagcttcgagttctaagtacggtaaaagccaca
atgatgggagcaaaaatggactctgaggaggatcaacaagcaatggacatccttgttttc
aatgcacaaaaattaaatcaagctgtgaaggaaacagtccgtgctgcagaatccgcatca
atacgtgttagatccgatgctggtttcaaattaaaatggattcgtaaacaaccatggttt
caataa
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