KEGG   Lepeophtheirus salmonis (salmon louse): 121127618
Entry
121127618         CDS       T08214                                 
Symbol
Nup44A
Name
(RefSeq) nucleoporin SEH1
  KO
K14299  nucleoporin SEH1
Organism
lsm  Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03013  Nucleocytoplasmic transport
lsm04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:lsm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121127618 (Nup44A)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    121127618 (Nup44A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsm03019]
    121127618 (Nup44A)
   04131 Membrane trafficking [BR:lsm04131]
    121127618 (Nup44A)
Messenger RNA biogenesis [BR:lsm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     121127618 (Nup44A)
Membrane trafficking [BR:lsm04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    121127618 (Nup44A)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR3_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd WDR55 EIF3I WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_HPS5 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 121127618
NCBI-ProteinID: XP_040578972
LinkDB
Position
13:complement(10929351..10930694)
AA seq 321 aa
MFSWKDLNCEHKDLIHDVAYDWYGHRLATCSSDQYVKIWDMDPDTGEWKLSSSWKTHSGS
VWKVTWAHPEFGQILGTCSFDRTAAVWEESPPGTWVRKTNLVDSRTSVTDIKFAPRQYGL
LLATCSADGVVRIYEAPDVMNLSQWSLQHEIPCKTTCSCLAWNPSSPKSAPLLAVGSDDS
ASSSLPKVFIFQYNESHRCWIKVESFSHVSEPVHDLAFAPNVGRSYNILAVASKDLQIIT
LKPNNESGYEVRLAGQYDDHGSTVWRVCWNVTGTILASSGDDGYVRLWKCNYLDNWRCVA
ILKGDVNKRAIPNFKSNNMKL
NT seq 966 nt   +upstreamnt  +downstreamnt
atgttctcctggaaggacttgaattgcgaacataaggatttaattcatgatgtagcctat
gattggtatggtcatcgactggccacatgtagttctgatcaatacgttaagatttgggac
atggatcccgacacaggtgagtggaagctgtcctcttcttggaaaacgcactctggatcc
gtatggaaagtaacttgggcacatccggagtttgggcagatccttggaacatgttccttt
gatcgtacagcggctgtatgggaagaatcgccgcctggaacttgggtgaggaaaacgaat
ttagtggattctcgcacatctgtgacggacatcaagtttgctccacgtcagtacggctta
ctacttgccacatgctcagcagacggtgttgttcgtatctatgaagctccagatgtcatg
aatctaagccaatggtcacttcaacacgagatcccttgtaaaacgacctgctcttgtctg
gcatggaatccctcatcacccaaatctgctccattacttgcagtcggctcagatgactct
gcttcttcatccttacccaaagtctttatctttcaatataatgagtctcatcgttgttgg
ataaaggttgaaagcttttctcatgtgtctgagcctgtacatgacctggcatttgccccc
aacgtaggtagaagttacaatattcttgcagttgcctcaaaagatcttcagattataact
cttaagccgaataatgaatcaggctatgaagtacgtctagcgggccaatatgatgatcat
ggatcaactgtttggagagtctgttggaatgtgactggaaccatattggcatcatcagga
gatgatggatatgttcgtttgtggaaatgtaattatttggataattggcgatgtgttgct
atacttaaaggggacgttaataaaagagcaattcctaatttcaagtccaacaacatgaaa
ctatag

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