Lepeophtheirus salmonis (salmon louse): 121127653
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Entry
121127653 CDS
T08214
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121127653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsm03032
]
121127653
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121127653
DNA replication proteins [BR:
lsm03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
121127653
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
121127653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
TopBP1_BRCT0
LIG3_BRCT
ECT2_BRCT0
DapB_N
Motif
Other DBs
NCBI-GeneID:
121127653
NCBI-ProteinID:
XP_071748981
LinkDB
All DBs
Position
13:3359901..3365428
Genome browser
AA seq
1437 aa
AA seq
DB search
MKGEDNVNIRFVLPLGKNQTTCSEDLAYAFDQTQDMGLDPIWIHHDEVLDLKYSKMDVFV
MDPFDGEAFESIKNSKATIVGPRCLLACLQKKEPVPELPYPMFTAAMKGLIVTSTGFEKE
KKAEIQKLIESMSGVYSNTFHDGVTHLIAAVVHSPKYSVAVEKEIPIMTEEWVRNVWKKS
QNDNVAATDGQFSRFKCPALMGLNISVSQMNPKDKDLLKKSIESHGGIYSKALDINSTNV
LIVPTPEGEKFSYATKWKIPTLNSNWVFDSIEKGYCLESDEYKIEKRNCSTPTKEDVSRL
TEVSLCSTIMGPVGDETTTIKVNETVENSGSISVIGKSGIRSTESWFKSLDIDRVIKAGP
FLDGCRIFLHGFDDVQKEHLRRVIQIAGATKMSQLIPSVTHMVVKSFAKTKHLKELNLNP
YQVTIQWIVESMHLGRMAPESDFAALKMPCLPPLFPKDEKVSTQTEQITQLGNDIPGQYA
AKQDDTTLADPLAPAVNQTTTNESDQSQSAKFLTNKTFSLVGLDEETEQELSEWVDEEGG
EIVSADYLGILDYLVLPVYGCNIHNFKAKNEVNHLWLSECLDKGEFLNIEYFCKPYLIDT
NLKDLLLKKGFFLRSLAEALGAISQETFVRKEKEDTKKSTHLICFSPDGNKYEAALRWKL
PVVSKDWVMACMTKMAWISEKPFLLGKSDVFSPDKPLPEHLEELSNNKSVSPLGNEEDLN
EISHDIENKNNENSTRYNFNTPINSKTIKNSMLALETPGLDIEKNATEEDRIEPIYRVEI
SERWCPPPDSQPSPSHLQQSYNHKQSLDDDNSNKISEMKTPEKPFGAFLGNEDPSPYTRK
YWKNQYDILISNRTNESERIKLRNEFIELEASRCKRVQERESRKFKLKNAMNELMDPKNL
RMQHEATMDFLEAKGLTVLERSEKSFDDLMEDKMNRQGMSWRYPGKRVKLIRDGSPGDNN
TIYKLPFEGVKLYVTKKCYGLIDCISNAVNRLGGSILGCYDDENVTHVVFSSNKVNDITK
EFRQARSDGKYVVSPDWVFACEEEKRLLNPSKYPHTLNARNSNTINMSATVDSLTTPKAC
KNFKKPKDEEKLKDLLQDITKMDLNTSKTSSSIKKIQMNMSSTECTTEISSLCEASNQDS
IAIDNQTLEHQIQCVDSMKSKENMILSEKENADDNASLANNSEFQSMDIPENMTEEALLQ
CEEDETNQKYRFMIAGYPDDLKAAFGDLIDSLNNSNISFSNLNCCDPKSTHIIAPKLFRS
EKMLCSIASGKMFLHSSYFDECMSHKSIITPLDKYEWGHPNNPFLSQLEDGGFEKSLASA
SYRWRHKIGSKRKGAFEGIVAIIHTTPKRREAFQRLIEFGGGKVITPNPPYYEPEDATHC
FAEPVKVPKYKIDYESLATRGIAVVEPIFINEFLINDPPPPVETYLIDEFKAYWKRR
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggggaagataatgtaaatattcgcttcgtcttgccactgggtaaaaatcaaact
acttgctctgaggatttagcctatgcttttgatcaaactcaggatatgggacttgatccc
atttggattcatcacgatgaagttcttgatttgaaatattcaaaaatggacgtctttgtc
atggatccctttgatggcgaagccttcgaatcgataaaaaacagtaaagctacaattgtt
ggtccccgttgccttttggcatgtttacaaaaaaaagagcctgtgcctgagcttccctat
cctatgtttactgctgctatgaagggccttatagttacgtccactggcttcgaaaaggaa
aagaaggctgaaatacaaaagctaattgaaagtatgtctggtgtatacagtaacacgttc
cacgatggagtgactcatcttatcgctgccgttgtccatagtcctaaatactcagttgcc
gttgagaaagaaattcctataatgacagaggaatgggtgcgtaatgtttggaaaaaaagt
caaaatgataatgtggctgctacagatggacaattttctaggtttaaatgccctgccctt
atgggtttaaacataagtgtgtcgcagatgaatccaaaggacaaagatttactcaaaaag
agtattgagtcccatggaggaatctactctaaagcattagatataaactcgaccaatgtc
cttattgtacccactcccgaaggggaaaaattttcttatgcaacgaaatggaaaatccca
actctcaattctaattgggtctttgattcaattgaaaagggatattgccttgaatctgat
gaatataaaattgaaaaaagaaattgttctaccccaactaaagaagatgtctctcgtctt
actgaagtatcattatgtagtactataatgggtccagtaggggatgaaacaacgaccatt
aaagtaaatgaaactgtagaaaattcaggatcgatttctgtgataggaaaaagtggtata
cgtagtacagagagctggtttaaaagtttggatattgaccgtgtaataaaagctgggcct
tttttggatggatgtcgaatttttctccatgggtttgatgatgttcagaaagaacatctc
agaagagtaattcaaatagctggagcaacaaaaatgtctcagcttatcccctcagtcaca
catatggttgtaaaatcgttcgccaaaacaaagcatctaaaagagcttaacttaaatccc
tatcaggtcactattcagtggattgttgaaagtatgcaccttggtagaatggctcctgaa
agtgattttgctgcactaaaaatgccttgtctacctccactttttcccaaagatgaaaaa
gtttcgacacaaactgaacaaattactcaacttggcaacgacattcctggtcaatatgct
gcaaaacaagatgataccaccttggctgacccccttgctccggcagtgaatcaaacaacg
acaaatgagagcgaccagtctcaatcagcaaaattccttacaaataaaacgttttctctt
gtcgggttagatgaagaaacagagcaggaattgagtgaatgggtggatgaagaaggagga
gagatagtatctgcggactacctgggtattttggattaccttgtcctccctgtttacggc
tgtaacattcataattttaaagcaaaaaatgaagtcaatcatttgtggcttagtgaatgc
cttgataaaggagagtttttgaatattgaatatttttgtaaaccgtatttgatcgatact
aatttgaaggatttgcttctcaagaaaggcttttttttacgctctttggctgaagctctt
ggtgcaatatcccaagaaacatttgtccgtaaagaaaaagaggatacaaaaaaatcaact
catcttatctgttttagtccagatggaaataaatatgaggctgccttaagatggaaactt
ccagttgtttcaaaagactgggtaatggcttgcatgactaaaatggcttggatttcagaa
aaacctttcctactagggaaatctgatgtcttttcccctgacaaacctcttcctgagcat
cttgaagagttatctaacaataaaagtgtttctcctttaggcaatgaagaagatttaaat
gaaattagccatgatattgaaaataaaaacaatgaaaattcaactagatataatttcaac
acgcctatcaacagcaaaaccataaaaaactccatgctcgctttggaaactcctgggtta
gatattgaaaaaaatgcgaccgaagaagatagaattgagcccatctatagggtagaaata
agtgaaaggtggtgcccacctccagattcgcaacccagtccaagtcatttacaacagtca
tataaccacaaacaaagcttggatgatgacaactcaaataaaatatccgaaatgaagaca
cctgaaaaaccttttggagcatttctcggtaatgaagatcctagtccttacacaagaaaa
tattggaagaatcaatatgatatattaatttcaaatagaactaatgaaagtgagagaata
aaattgaggaatgaattcattgaacttgaagcttctaggtgtaaaagagttcaggaaaga
gagtcaagaaagttcaaattgaaaaatgcaatgaatgaattaatggaccctaaaaatctt
cgtatgcaacatgaagcaacaatggattttcttgaagctaaaggacttaccgtattggaa
aggtcagaaaagtcattcgatgatctaatggaagacaaaatgaatagacagggaatgtct
tggagatatcctggtaaaagagtcaaacttataagggatggtagtcctggagataataac
actatttacaaactaccattcgaaggtgttaaactatatgtgacaaaaaaatgctacgga
cttattgattgcatatcaaatgctgtcaatagactcggaggatctattcttggttgctat
gatgatgagaatgttactcatgttgttttctcttcaaataaagttaatgatattaccaaa
gagtttcgacaggcgagatctgatggaaagtatgtcgtttccccagattgggtttttgcg
tgtgaagaagaaaaacgactgctgaatccttctaaatatcctcatacattgaatgcaaga
aattcaaatactataaatatgagtgcaactgttgatagtttaactactcccaaagcttgt
aaaaatttcaaaaagccaaaagacgaagaaaaattaaaagatttgttacaagatataaca
aaaatggatttgaatacctctaaaaccagtagttcaattaaaaaaatacaaatgaatatg
tcatcaacggagtgtactacagaaatatcttctctttgtgaagcatctaaccaagattcg
attgcaattgataaccagacacttgaacatcagatacagtgcgtagattctatgaagtct
aaagaaaatatgatattgtctgagaaggagaatgctgatgataatgcatctttagctaat
aatagtgaatttcagtccatggatatacctgagaatatgaccgaagaagcacttttacaa
tgtgaagaagatgaaaccaatcagaaatatcgttttatgattgcaggttatcctgacgat
cttaaggctgcatttggagatctgatcgactctctaaataatagcaacatttctttttca
aatctgaattgttgtgacccaaaatcaactcatattatagctccaaaattatttcgatca
gaaaagatgttatgttccattgcatctggaaaaatgttccttcatagctcatattttgat
gaatgtatgtcgcacaagagtatcattactcccttagacaaatatgaatggggacatcca
aataatccgtttctttctcagttagaggacgggggctttgaaaaatcactggcatcagct
tcatacagatggcgacataaaattggaagtaagcgaaaaggagcttttgaagggattgtt
gccataattcatacgactcctaagcgcagagaagcttttcaaagactaattgagtttggt
gggggtaaagtcataactcctaatcctccttattatgaaccagaagatgcaactcattgc
tttgcagaacctgtcaaagttccaaaatataaaattgattatgagagtctcgctactcgt
ggaatagccgttgtagaacccattttcatcaacgagtttctcatcaatgacccccctcct
cctgttgaaacttatttgattgatgaatttaaagcctattggaaaaggcgataa
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