Lepeophtheirus salmonis (salmon louse): 121127706
Help
Entry
121127706 CDS
T08214
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121127706
Enzymes [BR:
lsm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121127706
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121127706
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-RING_2
zf-RING_4
zf-RING_UBOX
zf-C3HC4_4
zf-ANAPC11
IBR_1
DUF5040
zf-Nse
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
121127706
NCBI-ProteinID:
XP_040579075
LinkDB
All DBs
Position
13:45522779..45523989
Genome browser
AA seq
268 aa
AA seq
DB search
MSEIVDPRYALRKRIRASVEGALQRCDEREQRTRRSRCRRQFCSVCEDFISGTQNEVMKH
MDTCIRVPSSDDSEEGSTFDEYEWAGQRRVRATGFLERGDSGFTSIKQGNEDEVLDIESE
LLHKLGPPQYTTADIIFPEAESAKEQSERDSLLLVLGHKKDFSNATKEKIEAEEHRDQIL
LEKTDELDESSDIAALQKQIKLLKLQNDELRNITLCKICMDNYEKPLVSLECWHAHCEQC
WMRTLGVKKLCPQCKVITNPEDLRKIFL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagatagtggatcctcgctacgctctccgtaaaaggattcgtgcttccgttgaa
ggagctcttcagaggtgtgatgagagagaacaaagaactcgtagaagtcgatgtcgacga
caattctgctccgtatgtgaggattttatatcaggaactcaaaatgaagtaatgaaacac
atggatacgtgtataagagtcccttcctcagacgatagtgaagagggatccacatttgat
gagtatgaatgggctggacaacgacgtgttcgtgccactggatttcttgaaagaggagac
tctggatttacttctattaaacagggaaacgaagatgaagtactagatattgagagtgaa
ttacttcataaactgggccctccgcaatataccacagcagatattattttccccgaagca
gaatctgccaaagaacagtcagaaagagactccttattgttagttttaggccataaaaaa
gatttttcaaacgcaactaaagaaaagattgaggccgaagaacacagggatcaaatcctc
cttgaaaaaacggacgaattggatgaatcttcagatattgctgctttacaaaaacaaatt
aagttattaaaactccaaaacgacgagttgcgaaatataactttatgcaaaatatgtatg
gacaattatgaaaaaccacttgtatctttagagtgttggcatgctcattgtgagcaatgt
tggatgcgaactctgggagtgaaaaagctctgtccccaatgcaaagtcattaccaatcca
gaagacttacggaaaattttcttgtag
DBGET
integrated database retrieval system
