Lepeophtheirus salmonis (salmon louse): 121127718
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Entry
121127718 CDS
T08214
Symbol
atms
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsm03021
]
121127718 (atms)
Transcription machinery [BR:
lsm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
121127718 (atms)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
121127718
NCBI-ProteinID:
XP_040579136
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All DBs
Position
13:10923714..10925649
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AA seq
532 aa
AA seq
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MTVKSPGGVVGSGASKGTGTTPSQVQAPTPGATATPRRSPMVAATAPPPTHREKRSEMVC
RVKYSNTLPDIPFDPKFISYPFESSRFINYNPTSLERNYKYELLTEQDLGVRVDLILPDA
FEIPCGAQNEELHPKDEKLLEDEMGHLAQGSSDLKRSARHAQVLSWMRRPDYISTEQTRY
QPTTIDKVESKIGFVVRKNLGNETALYMDREAQVRAIEKTFSDTEKEITTHYSNKPDIKP
VEVIPVLPDDQMWKYPCAQVIFDSDPSPPGFPTHAQVEMMSQAMIRGVMDESGEQFVAYF
LPAKDTMEKRHADFEADRDYADEEEYEYKMAREYNWNVKSKANKGYEENFFFVVRNDGIY
YNELETRVRLSKRRLKAGQQPSNSKLVVKHRPLNKQEHRMQRYREKNLEPPMEEDEDVSE
EEEEEEEEETNVRETREDRSRSKSASPGSKSVSPRSKSGSRSRSPSRSRSRSKSRSRSSS
PVRSRSISRSKSRSLSPRSRSVSHSRSPSRSVSRSPSRSRSVSRSNSGSNSN
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgaagagtcctggaggtgttgtagggagtggtgcttccaagggaacaggcacg
acgccgtctcaagttcaagctccgactccaggagcaacggctactccacgtcgttctccc
atggtggcggcgacggcgccccctcctacgcatcgagagaagcgttctgagatggtttgc
cgtgtgaaatactccaacacacttccggatattccttttgaccccaagttcatttcttac
cctttcgagagctcccgctttatcaattataaccccacttccttagagcggaattacaag
tacgagttgttaacagagcaggatctgggggtccgagtggacctcatccttccggatgca
ttcgaaatcccttgcggagctcagaatgaagaacttcatcctaaagacgaaaaactttta
gaggatgaaatggggcatctcgctcaaggctcctctgatctcaaacgctctgcacgccat
gcccaggttctttcctggatgagacggcctgactacatctccacagaacagactcgttat
caacccacgaccatcgacaaagtggaatccaaaattggctttgttgtcaggaagaatctc
ggtaacgaaacggccctatatatggatagagaggcacaagtacgtgcaattgagaaaaca
ttctccgatactgagaaagaaatcacgacacactattctaacaaacccgatattaaacct
gtcgaagttattcctgttctcccagacgaccaaatgtggaaatatccttgtgcccaagtt
atttttgattcggatccttctcctcctggtttccctacgcatgctcaagttgaaatgatg
tcccaagccatgattcgaggtgtcatggatgaatctggagagcaatttgttgcatatttt
ctcccagctaaggataccatggaaaagcgtcatgctgattttgaagcagatcgtgactac
gctgatgaggaagaatacgaatataaaatggctcgggaatacaattggaatgttaagtcc
aaggcgaataaaggctacgaagagaatttcttctttgtggttagaaatgatggtatctat
tataatgagttagaaacaagggtacgtctaagtaagagacgtcttaaggcgggtcaacaa
ccatcaaactctaaattggtcgtcaaacaccgacctttaaataaacaagaacacagaatg
cagcgctatcgagagaaaaatctggaaccaccaatggaagaggacgaggatgtatccgaa
gaggaagaagaagaagaagaagaggaaactaatgttagagaaactcgtgaagatcgttca
agatcaaaatctgcttcccctggatcaaaatctgtgtcccctagatcaaaatcaggatct
cgttctaggtcaccatcacgttcgagatcaagatccaaatctagatcccgttcctcctcg
cctgttcgctctagaagcatatctcgatcaaagtcgagatccttatcaccacgatcaaga
tctgtatcccactccagatcaccttcacgctcagtctctaggagcccttctcgctctaga
agtgtttctagatcaaattctggctctaactctaattga
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