Lepeophtheirus salmonis (salmon louse): 121127730
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Entry
121127730 CDS
T08214
Symbol
Nup154
Name
(RefSeq) nuclear pore complex protein Nup155 isoform X2
KO
K14312
nuclear pore complex protein Nup155
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121127730 (Nup154)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121127730 (Nup154)
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121127730 (Nup154)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
121127730
NCBI-ProteinID:
XP_040579145
LinkDB
All DBs
Position
13:44340029..44364239
Genome browser
AA seq
1409 aa
AA seq
DB search
MWWTGAVVLTAGAGALVLGAAHPTSVTIVKCESRSPNLDSQLESLGDSYLLAFLIPLHIN
MLVGGGSSTMLDGGRNLFDGIELAGRNVEKMLGGDSTFPSLVDKLRLGGGGPTLSGLQES
DYPWLRGPGGTSSFGESLRELSSVKNVSLPAELVEHFGHMQCNCMMGLFASIGRAWLTID
SDIYVWKFHDCSDLAYFDGLSDTILSVALVSPKPNIFQPHIKHLLCLTTAVEIVLLGVSF
SSPQESETEEMHLLPEPLYTLPTDSTYMITLVGTDLGRIFMGGKDGCLYEFSYTSDSSWF
GGGKKVSKINHSTSALSFLLPNFINFSGEDPLIQIQVDDSRKMLYSRSEKGVIQVYDLGS
DGFQMRNVATLSQHSIVQDAVKIASNIDKSNFHPIVDISPLFILESPHIALVAVSKSGVR
FYFSVGTSRPDDRPTHCILQHVRLPPGFSASGTLHKPNKVHMSYHKNGSLLLACSPNENS
DDVLFLLSSDGYPFQSLLMESQSIIQLDGHSWALSEIPQETSISKMYQNSFGNVYPPLMA
VQHGVKPRKFVVLNAKGTHIISQMRPVDHLKQLLIDHGEDSDIVKAFFSLHGETQASATA
LILACSTESVVNMRVSDMAVRSFFLFGGEPRFVFSQQSQPSQVNQGQPHHQFHPHIVSTP
MRPNLPPQSPQSPQQQQFGSPVMPEIQYSGKHNGLYLYFSRIIRPVWLNAVAIKEKDSNY
LKALLESNELDWIIHQLRCLNNFLEKNATTHAERSGINGMGYTTTHHHPHHHQLTSLQHK
TQQDAFLRERQSLMCLQQLIVHSIQVLGLMKVVCDHQFNEVVSVLNQDECNMLKSILYRD
LIVTPHGKELCNRLVQAIISRYLKDNASTDAISNRLREVCPILYNNEDALSSKAHEILIA
AKAQTNLIQREKMLKESLSLCKDIAAKLNLEVIVSHFTAVHYFQGAVEVCLAAAAKRDPQ
GLALHYYKNNEPNEDDQGLEAFMTRMSCYGYITEMLRKLLDTGSILPGNVPGVPRSPGPL
PPPDPNQIPPEEASVYAEKVLQTCLKSDDQFFHAALYQWLVDEKHYERLLEIQSPYLEDF
LKRGTSHHPGTLLMFDLLWKHYEKTQSYAAAAKILSKLAERHSTEVTLKERLEYLSRAIM
CVKSGEMGSETNAAGELLHDLEEKMEVARVQLQILDALNTHGGHEVSSAVSRLNSDLLDI
STLYQDFAEPYELWECQLSVLHCAGHPDQMLIETLWEHIINAETRNEGGGPINPYLAKTK
IAGLSTKIKTLGRIYASSQKYFPLEYIIKKLESYSCIAKEDYCWVFNSMLSIGVSMPKIL
EIYNKLCLSNDPIWFKNGSPNHLLVVLANILNTFAESPSSVSYHERRSFVVTCQDAVVSY
LGQLYTKPDSASAALIKELKCIQAKLERL
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgtggtggactggtgcggtcgtgctgactgctggtgctggggcgctggttctaggagca
gcacacccaacctctgttactattgtgaagtgtgagtcaaggagtccaaacctcgactct
caactggaatcgctcggggattcttatttgttggcgtttctaatcccattacacataaat
atgctggtcggtggaggaagctcgaccatgttggatggcgggcgaaacctattcgatgga
atcgagctggcggggcggaatgttgagaaaatgctaggcggggattccacatttccgtca
ttggtggacaaacttcgattaggtggaggaggtcccacgctttccggtctccaggagagt
gattatccctggcttcgtggtcccggaggaacgtcttccttcggggagagtctccgagaa
ttgagcagtgtgaagaatgtttctcttcccgcagaactcgtggaacactttggccatatg
caatgcaattgtatgatgggactctttgcctccataggaagggcttggctcaccattgac
agtgatatctatgtttggaaattccatgattgctcagatttagcttatttcgatggactc
agtgatactattctaagtgtggcacttgtatcccctaagcccaatatttttcaacctcac
atcaaacatctcctatgcttgacaactgccgttgaaatagttctacttggcgtgtctttt
tcaagcccacaagaatcagagacagaggaaatgcatcttctcccagaacctctttacacg
ctccccacagattcaacatacatgattactcttgttggtacggaccttggtcgcatcttt
atgggtggaaaagacggatgcttgtatgagttttcctatacatccgactcgagttggttt
ggtggtgggaaaaaagtctccaaaatcaatcattccacctcggcactttcctttcttctt
ccaaattttattaatttttctggagaagatcctctaattcagatacaagttgatgactca
agaaaaatgttatactcgagatcagaaaaaggtgtgattcaagtttatgatttggggtct
gatggatttcaaatgagaaatgttgcaacattgagtcaacattctattgttcaggatgca
gttaaaattgcttcaaacattgacaaatctaattttcatccgattgtcgatatttcacca
ctgttcatattagagtctcctcatattgcattagttgctgtaagcaaaagcggggttcgt
ttttatttctctgttggaacttcaagacctgatgataggcccacccattgtattcttcaa
catgtcagacttcctcctggattttctgcatctggtacacttcacaagcccaacaaagtc
catatgagctatcataaaaatgggtctcttttgttggcttgttcacccaatgaaaattcg
gatgatgttctctttcttttgtccagcgatggatatccttttcaaagtttactgatggag
tcccaatctataattcaattggatggtcattcttgggctttaagtgaaattcctcaggaa
acctcaatatcaaaaatgtatcaaaattcatttggcaatgtttatccacctcttatggct
gtgcaacatggtgtaaaacctcgcaaattcgttgttttaaatgctaaggggacacatatt
atttcacaaatgcgccctgttgatcatcttaaacaattattgattgatcatggagaagat
tcagatattgttaaagcttttttttctcttcatggagaaacccaagcatctgccactgct
ttgattttggcgtgtagtactgaaagtgtagtaaatatgagggtttcagatatggcagtc
agatcattctttttatttggtggggaacctcgatttgtgttttcacagcagtctcaacca
tctcaagttaatcaaggtcagccacatcatcagtttcatcctcatattgtaagtacgccc
atgaggccaaatttaccacctcaatcccctcagagtcctcagcaacaacagtttggaagt
cctgtaatgcccgaaattcagtattctggaaaacataacgggctttacctctacttttcc
cgcattattcgacccgtatggttgaacgctgttgctattaaagagaaagattctaactat
ctgaaagcattattagaatcaaatgagttagactggattattcatcagttaaggtgctta
aataactttttagaaaagaacgcaaccactcatgctgaacgctctgggattaacggtatg
ggttatacaacaactcatcatcaccctcaccatcatcagttaactagtcttcaacacaag
acacaacaggacgcattcctgagagaaagacaaagcctaatgtgtcttcaacaactcatt
gttcatagtattcaagttcttggactcatgaaagtagtctgcgatcatcagttcaatgaa
gtagtttctgttttaaatcaagatgagtgtaatatgcttaaatccatactatatagagat
ctaattgtgactccacatggtaaggaactttgtaatagactcgtacaagccattattagc
agatacttaaaagacaacgcaagtactgatgctatttccaaccgacttcgtgaagtttgc
cctatattatataacaatgaggatgctcttagttcgaaggctcatgaaattcttattgct
gccaaggcacaaacaaatctgattcaacgagaaaaaatgcttaaagaatctttaagttta
tgcaaagacattgctgccaaattaaaccttgaagtaattgtgagtcatttcacggctgtt
cattactttcaaggtgctgttgaagtttgtctcgctgcagcagctaaaagagatccccag
ggacttgctttgcactattataaaaataatgaacctaacgaagatgatcagggactagaa
gccttcatgactagaatgagttgctacggatatataactgaaatgctcagaaagcttctt
gatactggttcaattcttcctggaaatgttcctggtgttcctcgtagcccaggacctctt
cctcctccggatcctaatcagatacctcctgaagaggcgagtgtctatgctgagaaggtc
ctgcaaacctgtttaaaaagtgacgatcaatttttccatgctgctctttatcaatggttg
gtcgatgaaaaacattatgaaagattattggaaatacagagtccttatcttgaggatttc
ttaaaaagaggaactagtcatcatccaggaactttactcatgtttgatctgttgtggaag
cactatgaaaaaacacaaagttacgctgctgcagcaaaaatattgtccaaattagctgag
cgacatagcactgaagtaacgttgaaagagcgtttagaatatttatcgcgagcaatcatg
tgtgtaaaatcaggagagatgggatctgagacaaatgctgcgggtgaacttttacatgat
cttgaagaaaagatggaagtcgctcgggtgcagttacaaatccttgacgcacttaataca
catggaggtcatgaagtttcatctgctgtatcaagattaaactcggatcttttagatatt
tcaactctttatcaagactttgccgagccatatgagctttgggaatgtcagttaagtgtt
cttcattgtgctggacatccagatcaaatgttaattgaaacattgtgggaacatattata
aatgctgagactagaaacgaaggaggtggtcccatcaatccatacttagccaagaccaag
attgctggactaagtacgaaaataaaaaccctagggcgtatatatgcctcatcacaaaaa
tactttcctctagaatatataattaagaagttagaaagttattcgtgtattgcgaaggaa
gactactgttgggtgttcaattccatgctttctattggagtgtcaatgcccaagatttta
gaaatttacaacaagttatgcctttcaaatgatccaatttggtttaaaaatggttctccc
aatcatttactggttgtactggcgaatattcttaatacctttgcagagtctccatcaagt
gtttcataccatgagcggagatcttttgtagttacatgtcaagatgctgtagtatcatac
cttggtcaactttatacgaaacctgacagtgctagtgctgcgctaataaaagagttgaaa
tgtattcaagcgaagctggagagattgtaa
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