Lepeophtheirus salmonis (salmon louse): 121127761
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Entry
121127761 CDS
T08214
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04120
Ubiquitin mediated proteolysis
lsm04137
Mitophagy - animal
lsm04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121127761
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121127761
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121127761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121127761
Enzymes [BR:
lsm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121127761
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121127761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Sina_TRAF
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
121127761
NCBI-ProteinID:
XP_040579181
UniProt:
A0A0K2SVU2
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All DBs
Position
13:30776195..30784679
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AA seq
413 aa
AA seq
DB search
MVRTRGGLIKSPSDPVGSNSTGRRLRSSRSKNSGSSSRNGDLYNRNESTHGNEAHWVSLG
NNINEDVEHTESAALSQTGNSDPPSNEAFIQNPNPQSSTNTNNNSSSSNEDNNDLVIYGT
RDSGVQTIGPSNESLSAHCSKSPGPSLGPGGSRTSTQLPEDLKINLECPVCGRISLPPIM
QCRNGHVTCNACRPKVQSCPVCREIDIDIRNMFAEKAITYLTIQCEFDQYGCKEIIQFRD
KEAHERTCKYRPYICPYIECDHKLSAEVVVDHVSSAHREECRRSDGPEITASMILIGRYF
GGDGAWSPRVITCFGKTFFDVALTRDRWLHHWVWLLGEEEEAMKYLYEITAFKGNTRYVY
GGEVASLRTTDDDIVSGGQCLSISDAIGRRLRDGDKIRYKLKLMRKNEVDLKR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggttagaactcgcggaggtttgataaagtccccgagtgatcccgtgggatccaattcc
acaggaagaagactccgttcttcccggtccaagaactccggctccagcagtcggaacggg
gatctctacaatcgaaatgaaagtactcatggaaacgaggcccattgggtcagcctgggg
aataatataaatgaggatgtggagcacacagagtccgctgcactaagtcaaacggggaat
tctgatcccccttccaatgaggccttcatccaaaacccaaatcctcagtcctccacaaat
actaacaataacagtagtagcagtaatgaagataacaacgatctagtcatttacggtaca
agagactctggggtccagactattggtccttctaatgaatctttgagtgctcattgcagc
aaatccccaggtccatcccttggacctgggggaagtcgaacaagtacgcagttacctgag
gatttgaaaataaatttagaatgtccagtttgtggaaggatttctttaccgccaattatg
cagtgtaggaacggacatgttacttgcaatgcctgtcgacctaaagtgcaatcctgtcca
gtatgtagggaaattgatatagatatccgaaatatgtttgcagaaaaggcaatcacgtat
cttacaatacagtgcgaattcgatcagtacggctgcaaagaaattattcagtttcgagac
aaggaagctcacgaacggacttgtaaatatcggccatatatatgtccctatatagaatgt
gatcataaactaagcgctgaagtcgttgtagatcatgtttcctctgctcatcgtgaagaa
tgcaggcgttctgacggtccagaaattactgcatccatgattctcattggtcgctacttt
ggaggtgatggagcctggtctcctcgtgtcattacttgttttggaaaaacattttttgat
gttgctctgacacgggataggtggttacatcactgggtatggttgctcggagaagaagag
gaggccatgaaatatctatacgaaattactgcatttaaagggaacaccaggtatgtctac
ggtggagaggttgcttcactaaggacaacagatgatgacatagtatctggtggacagtgt
cttagcataagtgatgcaattggaagaaggctcagagatggtgataaaattcgttacaag
ctcaagttaatgcggaaaaatgaagttgatcttaaaagatag
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