Lepeophtheirus salmonis (salmon louse): 121127776
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Entry
121127776 CDS
T08214
Name
(RefSeq) uncharacterized protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04120
Ubiquitin mediated proteolysis
lsm04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121127776
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121127776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121127776
03036 Chromosome and associated proteins [BR:
lsm03036
]
121127776
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121127776
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121127776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_EML_2
EIF3I
Beta-prop_Vps41
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
F-box
WD40_like
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
121127776
NCBI-ProteinID:
XP_071749188
LinkDB
All DBs
Position
13:complement(5429794..5453006)
Genome browser
AA seq
491 aa
AA seq
DB search
MSHRPNINLGRADRLMTWNPTMNIYKVNRFNLLTDMPSFKYSRTNNENRFDIIESLLDRN
LIHVVENIFDRIDTESIIYSLVLVCKLWRDFLTFNYLKKWAEKNLQSNSSLKELARKERW
SRYLLIDDKDDSDGSEIDEDNQDMYRKICSRIHQLQEIWRYREPKLRRLNCESFVLSCRL
MGDKELLTGLNSGILQLWNMDWNAKVKEAVIHDKGIKCLDVSEKYIVSGSYDCTAKLFRR
SDWAYLRVITVHTDSIWDLCIHQGKMLITAGLDGTIGIFNINPETEDVSVIKILQDHNDL
VSAIDYNGEFLVSGYEDARILIRNFSMSCEDFGIIGRLEGHTGGITGLEINTADNTTFAS
SSYDGTVRLWSLRSDKNQNYPCLKVLTDPEHFVRCLKFHGNILTSGDFGGFVHCWNVEVG
SSNVTIKNHRKFAAHKSHIVCIQFTAQKLVTGSRDKTVLIQDFWGKLLETEQIRRKKEDQ
KEKRISRFLRR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtcacataggcctaatatcaacttgggacgtgcagatcgtcttatgacatggaatccg
acgatgaatatttataaagtgaacagatttaatctcctaacagatatgccttcttttaaa
tactcaagaaccaacaatgagaatagattcgatatcattgagtccctactggataggaat
ttaattcatgtggttgagaatatctttgatcgaattgatacagagtctataatatattcc
ttagtccttgtttgtaagctttggagagattttcttacattcaactatttaaaaaaatgg
gctgagaaaaatcttcagtctaattcttctctgaaggaacttgcaagaaaggagagatgg
tctaggtatctattgatcgatgacaaggacgatagcgatggctcagagattgatgaagat
aatcaggacatgtaccgaaagatttgctcgcggatacatcaacttcaagaaatttggcgc
tatagagaaccaaagctgcggaggcttaattgtgaaagctttgtactttcctgtcgtttg
atgggtgataaagagcttctaacaggcttaaactctggcattttacaattatggaacatg
gattggaatgccaaagtcaaagaagcggttattcatgacaagggtattaaatgcttagat
gtgagtgagaagtatatagtaagtggaagttatgactgcacagctaaactttttcgccga
agtgattgggcatatctgagagtcattacagttcatactgactctatttgggatctctgt
atacatcagggcaaaatgttaattacagctgggcttgatggaacaatagggatattcaac
ataaacccggaaacagaagatgtcagtgtaatcaagattttacaagatcacaacgacttg
gtgtctgccattgattacaatggtgaattcttagtcagcggttatgaggatgctcgcatt
cttatacgaaatttcagtatgtcatgtgaggattttggaatcattggacgattagaagga
cacactggaggtataactggactagagataaatacagctgacaacacaacttttgcatcg
agttcctacgacggaacagttcgtctttggtctcttcgttcagacaaaaatcagaactat
ccttgtctaaaagtgcttacagatcctgagcactttgtcagatgtctaaaatttcatgga
aatatccttacatcaggagattttggaggctttgtccactgttggaacgtggaagtgggg
tctagtaacgtaaccattaaaaatcatcgtaaatttgcagcccacaaaagccacattgtt
tgcatacaatttactgcacaaaaactagtgacaggtagtcgggataaaacagttcttatc
caagatttttggggcaaattgttagaaaccgagcaaatacgacgcaagaaagaggatcag
aaggaaaaacgaatatcaagatttctaagacgataa
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