Lepeophtheirus salmonis (salmon louse): 121127782
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Entry
121127782 CDS
T08214
Symbol
Rbp6
Name
(RefSeq) RNA-binding protein Musashi homolog Rbp6 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121127782 (Rbp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121127782 (Rbp6)
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121127782 (Rbp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121127782
NCBI-ProteinID:
XP_040579203
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Position
13:complement(7780875..7916039)
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AA seq
444 aa
AA seq
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MESIVALTQPQQQPITQPQQVTEDVPNDPGKMFIGGLSWQTTPEGLKEYFCNFGDIAEVM
VMKDPTTRRSRGFGFVTFSDPNSVDKVLSNGSHDLDGKKIDPKVAFPRRAHPKMVTRTKK
IFVGGLSAPSTLEDVKNYFEQFGRIEDAMLMFDKQTNRHRGFGFVTFESEDVVDKVCEIH
FHEINNKMVECKKAQPKEVMIPTTIATRTRPVIRGTNGTTPNSYGFHAAAAAYAAYAAGR
GYSNYTNFGITGGLTSYPDSLRIHFEHFNLYKPSFASYGYFPTVTAPVTSTTSLIPNPDR
SNGTYDPTHTAFAITTTSRPSSDVVTTNSLRTNDLSGAQNGTPALVAQALSAMTLKDTCS
ILPLINNYPAANGPFATAPRFAQTNSPGPTEVQTGGQGATQIYGSPQDATTYVQQTSSPQ
PAGFQALAMSRGAMIPAAFTNGYH
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggagtccatcgtagccttaacacaacctcaacaacaaccaataacacagccgcagcag
gttacagaagatgttccaaatgatccagggaaaatgtttatcgggggtctctcatggcaa
acgactcccgaaggacttaaagaatatttttgcaattttggggatattgcagaagtgatg
gtcatgaaggatccgactacacgacgttctagaggctttggatttgtgactttctctgat
ccgaatagtgtggacaaagtgctctcaaatggatcacatgatctagatggtaaaaagatt
gatccaaaggtagcttttcctcgacgtgctcacccaaagatggtcacacgaaccaagaag
atatttgtaggcggactctctgcgcccagcactctcgaggacgtcaaaaactactttgaa
cagtttggccgaatcgaagatgccatgttgatgtttgacaaacaaacaaatcgtcatcgt
ggttttggctttgtaacatttgagagtgaagacgttgttgataaagtctgtgaaattcac
tttcacgaaattaataataaaatggtagagtgtaaaaaagcccagccaaaggaggtcatg
atacccacaacaatcgcaacccgaactcgtccagtcatacgaggaacaaatggaacaacg
cccaacagttacggcttccacgctgcagccgctgcatatgcagcctatgctgcaggcaga
ggctactcaaactatacaaactttggaataacgggcgggcttacaagttatccagattca
cttcggattcattttgagcacttcaacttatataaaccaagttttgccagctatggttac
tttccaacagtgacagctccagtcacctcaactacaagtctcattcctaatccagatcgt
tcaaacggtacctatgatccaacacacacagcgtttgcaattactacgacaagtagacct
tcttctgacgttgtgacgaccaattcccttcggactaatgatttatctggagcacaaaat
ggaactcctgctcttgtggcgcaggctttgtctgcaatgacactcaaagacacgtgttca
atattacccttaatcaacaattatccagcagcaaatggcccctttgcaacagctccaaga
tttgcacaaacgaattctccaggtcctacagaagtgcaaacagggggtcaaggagcaaca
cagatatatggatcaccacaagacgcgacaacatacgtacaacaaacctcgagtccacag
cccgccgggtttcaagccttggcaatgagtcgaggagcaatgattcctgcagcatttacc
aatgggtatcactga
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