Lepeophtheirus salmonis (salmon louse): 121127796
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Entry
121127796 CDS
T08214
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121127796
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsm02000
]
121127796
04147 Exosome [BR:
lsm04147
]
121127796
04090 CD molecules [BR:
lsm04090
]
121127796
Enzymes [BR:
lsm01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
121127796
Transporters [BR:
lsm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
121127796
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121127796
CD molecules [BR:
lsm04090
]
Proteins
121127796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
RsgA_GTPase
Rad17
AAA_22
AAA
AAA_21
AAA_15
AAA_16
PRK
Zeta_toxin
AAA_23
NB-ARC
AAA_5
AAA_30
AAA_7
AAA_14
RNA_helicase
AAA_29
ATP-synt_ab
MeaB
DUF815
Glycophorin_A
DUF5474
Motif
Other DBs
NCBI-GeneID:
121127796
NCBI-ProteinID:
XP_040579247
LinkDB
All DBs
Position
1:40073284..40082864
Genome browser
AA seq
1422 aa
AA seq
DB search
MRWNKYIVTPEKERKKMPDVSHMNGIINSGFEEIELNDNNSVLNPEEEKKNGETVEHKSS
VVSNDNLKLDINEDISNTHVPFMKLFSYATRSDLIFIGIGILAALIGGLSLPFMIMLFGE
LTDTFILSNPLSSDICLIENGTCCSNNGTVDLSLEDCDLNEDDITQLFKPINFLDGVARF
GQGTAIIGLINFITSYIFVTSLNFTAERQVHRIRKAFFKSLLNQDIKWFDTHETGDFATK
ITEDLNKLQEGIGEKIGLFIFFITIFISSLITAFIHGWELTLVILSAMPILMIAVGIIAK
SQTALTVKESNAYSKAGSVAEEAFSSIKTVMSFQGQNTEIQRYKENLSEAQKTGILRGLL
TGIGGGLMWFIIYSSYAIAFWYGVKLILDDRESCIASPTDCQIRYGPSNLLIVFFSVLMG
AMNIGQASPYVEAFAIARGAASSVFQIIQSTPAIKSDYDHLQRQQDKAPPFTGRITFKNV
HFEYPSRPTVKVLSGLSFEASPGKTLALVGPSGCGKSTVIQLIQRFYDPSFGVVSIDGED
ITTLDPHWLRSHIGIVGQEPVLFEYSIKENITMGLQGEISEKMIDDTCKAANAYDFIQRL
PKKYDTIVGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKA
RKGRTTIIVAHRLSTIRSADAILVMKDGYRVDYGTHESLKSNKTGLYCSLVNAQDCQVDQ
DEGLPLFNPELNYEEEDEVYDLEQVENEMNSMTYGSISGGSSWNRRHHFVRPTLERRHST
GSGYSEDSLKIEDALDVAGSAIGIARVGSRKIRRTSTNFTDNEYLEAEEMKSVNSNVGFF
TVLRENSNEWLYIFMGCIASVVMGASMPVYAHLFGEVLGVLSKSIEEARVNSITYSMYFL
LVGIIVGFSMFMQIFMFSLSGELLTTKLRIKAFTAMLNQEVGWYDESVNSTGALCSRLSA
DASAVQGATGSRLGTIIQVTLTILMSISAALYFNIKLGLVGTLFVPFVLIGAWFQGKIIT
SQDNLEKDALSRSARIAIEAINGIRTVVGLRLEESFQEKYSTELKDPHESAIKNSHLRGL
IFGFSQSIPFFAYAGTMYYGGTLVESDGLPYKNVFKVAETLILGTLMVGQATAFGPNYTK
ARIASIRIFKLLNREPKIRSDVIPNTDEMATNMNGEVTFTNAGFYYPTRKSVKVLRDLKL
SIKSGQSIGIVGSSGCGKSTIIQLIQKFYDLSSGKLELDSKDSESINVMWLRSKIGIVSQ
EPNLFNRSIRENICYGLNKRNDVSMDDIIQAAKDANIHSFIASLPQGYDTRVGNAGTMLS
GGQKQRIAIARALIRNPSLLLLDEATSALDTESEKVVQEALNKALENRTSITIAHRLSTI
KNVDKIFVLNQGKVAEAGSHESLLLLKGFYYKLWTNGTQRKI
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggaacaagtacatagtaaccccagagaaggagcggaagaaaatgccagatgtg
agtcatatgaatggaatcatcaactctggcttcgaagaaattgaattaaatgataacaat
agtgttcttaatccagaagaagaaaaaaagaacggggaaacagtagagcacaaatcctct
gttgtttccaatgacaatctcaaattggacataaatgaagatataagtaatactcatgta
ccgtttatgaaacttttttcttatgccacaaggagtgacttgatattcattggtattggg
attctagctgcacttattggcggactatcacttccatttatgataatgctctttggagag
ttgacagacacatttatactgagtaatcctttatccagtgatatttgtttgatagaaaat
gggacttgttgttcaaataacggaacagtggatttatccttagaggattgtgatttgaac
gaggatgacattacgcaattatttaaacctatcaatttcttggatggagtagctcgtttc
ggtcaaggaacagctatcattggtttaatcaatttcattacttcatatatttttgtcaca
tctttaaattttacggctgaaagacaagtacatcgaatccgaaaagccttttttaaatct
ttactcaatcaagatatcaagtggttcgatactcatgaaactggggactttgctacaaag
atcactgaggatttgaacaaacttcaggaagggattggtgaaaaaataggactttttata
ttttttatcacaatatttatatcaagtctgataactgctttcatacatggatgggagcta
actctagtaattctttctgcaatgcctatactaatgatagctgtaggaataattgccaaa
tcacaaacagctcttacagtgaaggagtcaaatgcctacagtaaagctggatccgttgca
gaggaagcattctcttccattaagactgtaatgtcatttcaaggacaaaacactgagatt
caaagatataaagaaaatttatctgaggcacagaaaacagggatactgagaggacttctg
actggaattggaggaggtttaatgtggttcattatatattctagctacgcaattgcattt
tggtatggggtgaaattaattcttgatgatcgtgaatcttgcatagctagtccaacggac
tgtcagattcgatatggaccgtcgaatcttctgatagtgtttttttctgtgttaatggga
gcaatgaatattggacaggccagtccttatgttgaagcatttgcaattgcaagaggtgct
gcaagttcagtttttcaaatcattcaaagcacacctgcgataaaatccgattatgatcat
ttgcagaggcagcaagataaagcaccacctttcacaggtcggatcacctttaaaaacgtt
cattttgaatacccaagtcgtccaacagtgaaagttttgtcaggtcttagctttgaggct
tcacctggtaaaacattggccttggtaggtccatctggatgtggaaaatcaactgttatt
cagttgatacaacgattttacgatccaagttttggcgtagtatcaatcgatggtgaggat
attacaactcttgatccacattggctccgaagtcatattggaattgtgggtcaagagcca
gttttatttgaatattccattaaagaaaacataactatgggcttacaaggggagataagt
gagaaaatgattgatgatacatgtaaggctgcaaatgcctatgatttcattcaaagactt
cccaagaaatatgacaccatagtcggagagaagggcgctcttctctcaggaggtcaaaag
cagcgaattgccatcgctagagctttaatacgaaatccttcaattctattattagatgag
gcatcttcagccttagactctcaaagcgagttcattgttcaatcagctcttgataaagct
agaaaaggccgtactacaattattgttgcacatcgtttatccaccattcgatcagcagat
gcgattcttgtgatgaaagatggttatagagtcgactacggaacacacgaatccctgaaa
tctaataaaacaggattgtattgttcattagtaaacgctcaggattgccaagtggatcaa
gatgaaggtctaccactgtttaatccagaactgaactatgaagaagaagatgaagtctat
gatcttgaacaagttgaaaatgaaatgaattcaatgacttatggttctataagtggagga
tcatcttggaatcgtcggcatcactttgttcggcctactttagagagacgtcatagtact
gggagtggatatagtgaagattcattaaaaatcgaagatgcactagatgtagctggttca
gctattgggattgcccgagttgggtcaagaaaaattcgtagaactagtacaaattttacg
gataacgaatatttggaagcagaagaaatgaaatcagtcaactcaaatgtaggattcttc
actgttctacgagaaaattctaacgaatggctatatatatttatgggatgtattgcatca
gtggttatgggagcctcaatgcctgtttatgctcatttattcggcgaagttcttggagta
ttatcaaaaagtattgaagaagctcgtgttaactcaatcacgtactccatgtatttcctt
cttgtagggattattgtaggatttagtatgttcatgcaaatatttatgtttagtctatct
ggagaactccttacgacaaagcttcggataaaggcgttcacggccatgctaaaccaagag
gttggttggtatgacgagtctgtaaatagtactggtgctctatgctcaaggttgtcggct
gatgcttctgcagttcaaggggcaaccggaagtcgtttgggcacaataattcaagtaaca
ctcacaatactcatgtctatatctgctgcattatattttaatataaaacttggattagtt
ggaactctttttgtaccatttgttcttattggagcctggttccaagggaaaataataact
tcccaagataacctcgaaaaggatgccctttctcgctcagctcggattgccattgaggca
attaatggaataaggactgtcgtgggactaaggttggaggaaagctttcaagaaaagtat
tctacagaattgaaagatccgcacgagtctgctataaagaattctcatttaagaggcctt
atttttggattttctcaatccatacctttctttgcctatgcgggtactatgtactacgga
ggaaccttagtagaatcagacggacttccttataaaaatgtctttaaagttgcagaaaca
cttatacttggaactcttatggtgggtcaagctacagcattcggaccaaactatactaaa
gcaagaattgcgtcaatacgtatatttaaacttttgaatagagagccaaaaattcgctct
gatgttataccaaatactgatgaaatggccactaacatgaacggagaagttacttttacg
aatgctggattttattatccaacaagaaaatccgtcaaagttttaagagatttgaaacta
tccataaagagtggtcaaagtattggaattgtaggctcttcaggatgtggaaaatcaacc
ataattcaacttattcagaaattttatgatctcagtagtggtaaattggaattggattcc
aaggactcagagtccatcaatgtaatgtggcttcgatcaaaaatagggattgtgtcacaa
gagccaaatttgtttaaccgttccataagggaaaatatttgttatggcttgaacaaaagg
aatgatgttagtatggatgacattattcaagcagccaaggatgcaaacatccatagtttt
atagcttcacttccacagggctatgacactcgagtcggcaatgccggaaccatgctttct
ggtggtcaaaaacagagaatcgctattgccagagcattgataagaaatccttctttatta
ttgcttgatgaagctacttcagccctggatacagagtcagagaaggttgtacaagaggct
ctcaataaagctttagaaaatagaacatccattacaattgcgcacagactaagtacaatc
aaaaacgtggataaaattttcgtcttaaatcaaggaaaagtcgcagaggctggaagccat
gagtcgttacttctgcttaaaggattttattataaactttggactaacgggacacaaaga
aaaatataa
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