Lepeophtheirus salmonis (salmon louse): 121128012
Help
Entry
121128012 CDS
T08214
Symbol
Shal
Name
(RefSeq) potassium voltage-gated channel protein Shal
KO
K04892
potassium voltage-gated channel Shal-related subfamily D member 2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsm04040
]
121128012 (Shal)
Ion channels [BR:
lsm04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
121128012 (Shal)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
BTB_2
DUF3399
Shal-type
Ion_trans_2
BTB_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
121128012
NCBI-ProteinID:
XP_040579524
UniProt:
A0A0K2T2R2
LinkDB
All DBs
Position
13:5932338..5938950
Genome browser
AA seq
660 aa
AA seq
DB search
MASVAAWLPFARAAAIGWVPIATHPLPPPPAMHGKQRCEDEKLIVNISGRRFETWQNTLE
KYPDTLLGSNERDFFYEEETGEYFFDRDPDIFRHILNYYRTGKLHYPRNECLTQYDEELA
FFGIMPDVIGDCCYEDYRDRKRENAERLMDDKLDEEEGADAIVPEEFRERMWRAFETPHT
STPALVFYYVTGFFIAVSVMANVVETVPCGEVPGRNQIQPCGEKYKIMFFCLDTACVMIF
TAEYFLRLYAAPDRFKFMRSVMSVIDFVAIMPYYIGLGLSDDNEVSGAFVTLRVFRVFRI
FKFSRHSQGLRILGYTLQSCASELGFLVFSLAMAIIIFATIMFYCEKSVDGSTFTSIPAA
FWYTIVTMTTLGYGDMVPSTNLGKLIGGICSLSGVLVIALPVPVIVSNFSRIYHQNQRAD
KRKAQKKARLARIQIAKATSGAAFVSKKKAAEARMAARAAGLEVNENDKEDIFEMQHHHL
LRCLEKTTNREFVEMDVPFNGGLRGIRATMSQGPSSLPSSPSIVHGSGWKNSLLGSCCGK
CSSSGCEDSCSKPSITHESKYSVSGNKKHDNLHNDTELNDVQIRGMYRENLTITGGFGRE
PSLNNNALGVVLGSPHAENSPVVISAVVSAPNPSSENNNSPSSPEVQPSSILPSVTVSNL
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggtggccgcctggcttcctttcgcccgagcagcagcgataggatgggttccc
attgccacccatcccctgcctcctcctccagcgatgcatggaaagcagcgatgtgaggat
gagaaactcattgtgaacatctcgggccgacgcttcgaaacgtggcaaaacacacttgaa
aagtatccagacactctccttggctccaatgaacgtgactttttttacgaagaggaaacg
ggagagtacttttttgatcgagatccggatatatttcgccatatccttaattactatcga
acagggaagctccattatccacggaacgagtgtttgactcagtatgacgaggaacttgcc
tttttcggaatcatgccagatgtcattggtgattgttgctatgaggattatcgtgatcgg
aagcgagagaatgctgagcgactcatggatgataagttagatgaagaagagggagccgat
gcgattgtgccagaggagtttcgagaacgaatgtggcgagcctttgaaacgcctcacacc
tccactccagcgcttgtcttttattatgtcactggatttttcattgcagtatctgtgatg
gctaatgtggtggaaacagtgccatgcggggaagttcctggacggaatcaaattcagccc
tgtggggaaaaatacaaaataatgtttttttgtttggacacagcatgtgtcatgattttt
actgcagagtactttctacgattatacgccgctccagatcggtttaaattcatgcgctcc
gtcatgagtgtcatagactttgtggccattatgccctactacattggtcttggcttaagt
gatgataatgaagtctctggagcttttgttacgcttcgcgtctttcgtgtttttagaatc
tttaaattctcccgtcattctcaaggtttgcggatcctaggatatactctccagtcctgt
gcctcagagctgggctttctcgtcttctctctagcaatggccatcattatctttgcaacc
attatgttctattgtgaaaagtctgtagatgggtccacttttacatccattccagctgct
ttttggtacaccattgtgactatgacgacactcggctatggtgacatggtaccaagtacg
aatctggggaagttgattggagggatttgctccctttctggagtacttgtcattgctctt
cccgtccctgtcattgtctccaacttttcaagaatctatcatcaaaatcaaagagcagac
aaacgaaaagcccaaaagaaagcccgactcgcaaggattcaaatagccaaagcaacctct
ggtgcagcctttgtctcaaagaaaaaggcggctgaagcacgaatggcagcccgtgctgcg
ggtctggaagttaatgagaacgacaaagaggacatttttgaaatgcagcaccatcattta
ctccgctgcttggagaaaaccactaatcgtgaattcgtagaaatggatgtgccctttaat
ggagggctaagaggaattcgagctacaatgtcacaaggtccttcttcccttccatcaagt
ccatccattgtccatggatctggatggaaaaactcactcttgggctcttgttgtggaaaa
tgtagttcttcaggctgtgaggatagctgttcaaagccctccattacgcacgagtccaaa
tacagcgtttcaggaaacaaaaaacacgataatcttcacaacgacactgagctaaatgac
gtacaaatacggggaatgtatagagaaaacctgaccataaccggagggtttggaagagag
ccatccctaaacaacaatgccttaggcgtcgttctgggatctccgcacgcagaaaactct
cctgttgtcatctctgctgttgtatcagctccaaatcccagctcagagaataacaatagc
ccttcatcccctgaagtacaacccagctctattttaccaagtgtgacagtatccaatcta
tga
DBGET
integrated database retrieval system
