Lepeophtheirus salmonis (salmon louse): 121128107
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Entry
121128107 CDS
T08214
Symbol
Rrp47
Name
(RefSeq) nuclear nucleic acid-binding protein C1D
KO
K12592
exosome complex protein LRP1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121128107 (Rrp47)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121128107 (Rrp47)
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
121128107 (Rrp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sas10_Utp3
Motif
Other DBs
NCBI-GeneID:
121128107
NCBI-ProteinID:
XP_040579611
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All DBs
Position
13:complement(27909398..27911047)
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AA seq
131 aa
AA seq
DB search
MSTNTNEESFPQELKETITDFHMNLKSGENVLGKLLNQKPDLDELTPVERARLELVSAFA
LNSLVWVSLRTKGVNPKDTQLKAELDRIKLGMLRLKEIKDKARRGKINLPAAKRFIKAGI
HHPAERSNDKY
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaaataccaatgaagagagctttcctcaagagttaaaagaaacaattactgat
tttcatatgaatttgaagagtggggaaaatgttttgggaaagcttttaaatcaaaaacca
gatctggatgaactgacacctgttgaaagagccagattggaattagtatctgcatttgct
ttgaattccctggtatgggtatctttaaggaccaaaggagtgaatccaaaggatactcag
ttaaaagctgagttggatcgcataaagttagggatgttacgactcaaagagattaaagac
aaagcacgtcgtggtaaaattaatcttcctgctgccaaaagatttatcaaagctggtatt
caccatccagctgagaggtcaaatgacaaatactag
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