Lepeophtheirus salmonis (salmon louse): 121128301
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Entry
121128301 CDS
T08214
Name
(RefSeq) uncharacterized protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03440
Homologous recombination
lsm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121128301
03460 Fanconi anemia pathway
121128301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121128301
03036 Chromosome and associated proteins [BR:
lsm03036
]
121128301
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121128301
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
121128301
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
121128301
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
121128301
FA (Fanconi anemia) pathway
Downstream FA components
121128301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_OB3
Rib_mS39_PPR
BRCA-2_helical
BRCA2DBD_OB2
Pepsin-I3
Motif
Other DBs
NCBI-GeneID:
121128301
NCBI-ProteinID:
XP_071749122
LinkDB
All DBs
Position
13:14105075..14110703
Genome browser
AA seq
1662 aa
AA seq
DB search
MENEDEKREFLRFFNIERDEEVEKDEEPDVDYILGPNIIPLKVHFQAPEHYVSLKNEKHF
ETTHCIESINVNKHVKSNTPSENPFNGVDNEMFPMNLCIEKYNKRGKSINEYVPSLTPLP
SPIKYEDQLKGKKEDIFYDTFNTGSDQLSAQLIQKNQNLITNEQLKISSHTFKELQERKI
IDSISIHNMKSTKQVPSNYGQLNSELEESEKLQDNVHQLFSHDSETLNSLKSAEKNVNLS
EKVTLCQSIESHEHIDKESNPFCQNNIFNFSPCKSLSEIGIVSSKMEKQRSCINTCDDKH
DTNNKYVSKAVEPIKTNRSNISEIHFKNNNSGFIQCGVGISKSAMDKAKNIFQGEDFNEL
YQKDSNDPNISSVHSFKVPTKPNGQNESHIQLKSSKNIGFIKCGSKESVGISKSAMDKAK
NIFQGEDFNELFQKDSNDPNISSVHSFKVPTKPNGQNESHIQLKSSKNIGFIKCGSKESV
GISKSAMDKAKNIFQGEDFNELFQKDSNDPNISSVHSFKVPTKPNGQNESHIQLKSSENI
GFIKCGSKESVGISKSAMDKAKNIFQGEDFNELFQKDSNDPNISSVHSFKVPTKTNGQNE
SHIQLKSSKNIGFIKCGSKESVGISKSAMDKAKNIFQGEDFNELFQKDSNDPNISSVHSF
KVPTKPNGQNESHIQLKSSKNIGFIKCGSKESVGISKSAMDKAKNIFQGEDFNELFQKDS
NDPNISSVHSFKGPTKPNGQNESHIQLKSSKNIGFIKCGSKESVGISKSAMDKAKNIFQG
EDFNELFQKDSNDPYISSVHSFKVPTKPNGQNESHIQLKTSKNRDDLSKFFNREIDSVDS
SKTISVCQNESFSSEDDTFDQDVFDTQFLEEVEKTENSYFNLKRKSPITFECSSNKKCNV
SILKLTNDKLLSNFQTDLYHLRQKLPSRVCLKKIALKSIPRTPGFLGQISTSNNHQIRLK
EIRDLLLSLSSVDNSKVNDDWIANHYKWIFLYLHSLSLRTELYDELSPLSILWRLKYRYD
REIAGSCRSALKKIYEGDDSPSKPIILFIAAIHSDTIELSDGWYSIHSVLKPSISKLISM
KKIKSGTKLYIEGAEIERDSSHGNCKPLEDEGRTRLNFSINSCRRARWWAKLGFHWGPRL
IIKLKSIKEDGGLVARVKVIIRRRYPLVYMEKKESKITYINERVYNKKMHALKNSKEEIA
EKIYSQVQKELEDKRIVSQKNKAQFRHGLKIINRTSNVEELYNLIETYADPSILESLSSS
QVDELKEFKNKESETFRNEMRHEVEARLKSYEETSRVEYVPVLRLKISDQSPNVFGTLSL
WKPSHELLSLLHEDRPFFIHCISANKVFFDEVNLSSLKSTVFREVSEDFKMNDYFGKSRS
LASILDIVMDEYDFKSNFNEVDLVGLVIQVNDPGRSNEKVVNSAYGSIYLSDLMGNFVRI
RFFNSLKDLGMETLIVPAQVIYFRNLSFRTKDLSLKEIPSLFMKEQTEAFSSSNDSIVSS
IITEFMESATPNFVDDSARLLATLLGTEIKSPCGYNKDKMSIGITPTSNERAQIADPHLF
SPSSTIEIVSNSPAALQSSRNQSKLLKLKSMNYADASPLLPIIPLPNGGTSKSNSYAKLY
KVPKRRRSKLSFEQEISSNREPRQESQEFEEAANLAMDNLEM
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgaagatgaaaagcgggagtttctacgtttcttcaacatagaacgtgacgaa
gaagtcgagaaagatgaagagcctgatgtggattatatcctggggcctaacattattcca
ctcaaagttcactttcaggctccagagcattatgtatcattaaaaaacgagaaacacttc
gagacaacgcattgcatcgaatcaatcaatgtcaataaacatgtcaaatccaacactccg
tcagaaaatccctttaatggagtggataatgagatgtttccgatgaatttatgcattgaa
aagtacaacaaacgcggaaaatccattaatgaatacgtaccatcattaactcctttgcct
tctccaataaaatatgaagaccagctcaagggtaaaaaggaagacattttttatgataca
tttaatactggaagcgatcaattgagcgctcaattaatccagaaaaatcaaaatctaata
actaatgaacaattaaaaatatctagtcatacttttaaagaactccaggaacggaaaatt
atagattctatttctattcataacatgaaatcaactaaacaagtgccatctaattatgga
caattaaatagtgagctggaagaatcagaaaaacttcaggacaatgttcatcaattattt
tctcatgattctgagacattgaacagtttaaaatcagcagaaaaaaatgttaatttaagt
gaaaaagttacgctctgtcaaagtattgaatctcatgaacatattgataaagaaagtaat
ccattttgtcaaaataacatattcaactttagcccatgtaaatctctttctgaaattgga
attgtttcttcaaaaatggaaaaacaaagaagttgtataaatacttgtgatgataaacat
gatactaataataagtatgtttctaaagctgtagaaccaattaagaccaacagatcaaat
ataagtgaaattcactttaaaaataacaatagcggatttattcaatgtggtgtcggcatc
agtaaatctgcaatggataaagccaaaaacatttttcaaggggaagatttcaatgagcta
tatcaaaaagattctaatgaccccaatatatcttcagttcactcctttaaagtgcctaca
aagcccaatggacaaaatgaaagtcatattcagttaaaatcttctaaaaacattggcttt
atcaaatgtggctcaaaggaaagtgttggtatcagcaagtcggcaatggataaagccaaa
aacatttttcaaggggaagatttcaatgagctatttcaaaaagattcgaatgaccccaat
atatcttcagttcactcctttaaagtccctacaaagcccaatggacaaaatgaaagtcat
attcaattaaaatcttctaaaaacattggatttatcaaatgtggctcaaaggaaagtgtt
ggtatcagcaagtcggcaatggataaagccaaaaacatttttcaaggggaagatttcaat
gagctatttcaaaaagattcgaatgaccccaatatatcttcagttcactcctttaaagtg
cctacaaagcccaatggacaaaatgaaagtcatattcaattaaaatcttctgaaaacatc
ggatttatcaaatgtggctcaaaggaaagtgttggtatcagcaagtcggcaatggataaa
gctaaaaacatttttcaaggggaagatttcaatgagctatttcaaaaagattcgaatgac
cccaatatatcttcagttcactcctttaaagtgcctacaaagaccaatggacaaaatgaa
agccatattcagttaaaatcttctaaaaacattggatttatcaaatgtggctcaaaggaa
agtgttggtatcagcaagtcggcaatggataaagccaaaaacatttttcaaggggaagat
ttcaatgagctatttcaaaaagattcgaatgaccccaatatatcttcagttcactccttt
aaagtccctacaaagcccaatggacaaaatgaaagtcatattcaattaaaatcttctaaa
aacatcggatttatcaaatgtggctcaaaggaaagtgttggtatcagcaagtcggcaatg
gataaagccaaaaacatttttcaaggggaagatttcaatgagctatttcaaaaagattcg
aatgaccccaatatatcttcagttcactcctttaaagggcctacaaagcccaatggacaa
aatgaaagccatattcagttaaaatcttctaaaaacattggatttatcaaatgtggctca
aaggaaagtgttggtatcagcaagtcggcaatggataaagccaaaaacatttttcaaggg
gaagatttcaatgagctatttcaaaaagattcgaatgacccctatatatcttcagttcac
tcctttaaagtgcctacaaagcccaatggacaaaatgaaagtcatattcaattaaaaact
tctaaaaacagggatgatttatctaaatttttcaatcgagagattgatagtgttgactct
tctaaaacaatttccgtctgtcaaaatgaatcatttagtagcgaagatgatacttttgat
caggatgtgtttgatactcagtttttggaagaagtagaaaaaactgaaaactcttatttt
aatcttaagaggaagagtcctattactttcgaatgttcatccaataaaaagtgcaatgtt
tcaattcttaagcttaccaatgataaattactttctaattttcaaacagatttatatcat
cttcgccaaaaattgccatccagagtttgtttgaaaaaaatagcgttaaaatcaattcct
cgcactccgggttttttgggacagattagtacttcaaataatcaccaaattagattaaaa
gagattagagatttattattatcgctctcttctgttgataactcaaaagtaaatgacgat
tggatcgcgaatcactataaatggatctttttatatttacattctctatcattacgaact
gaattgtatgacgaacttagtcctttgtctattctatggagattaaaatatcgttatgat
cgtgaaattgctggtagttgtcgatcggctctgaaaaaaatatatgaaggagatgattct
ccttcgaagcccattattttatttattgctgcgatacactcagatactatagagctctcg
gatggatggtactcaattcattctgttttgaagccttctatctctaaactcattagtatg
aaaaagatcaagtctggtactaagttatacatcgaaggggctgaaattgaaagagatagt
agtcatgggaattgtaagccattggaggatgaaggtagaacaagacttaatttttctatt
aattcatgtcgacgagcaagatggtgggccaaactagggtttcactggggcccaagactt
attattaaattaaaatctattaaagaagacggaggacttgttgcaagagtcaaagtaatt
attcgtagacgatatcctcttgtttatatggaaaagaaagaatcgaaaatcacttatatt
aatgaaagagtatataacaagaaaatgcatgcattaaaaaattcgaaggaagaaattgcg
gaaaagatttattcgcaagttcaaaaagagttggaagataagagaatagtgtcacaaaag
aacaaagctcaatttcgacatggattaaaaataataaatcgtacgtctaatgttgaagaa
ttgtataatttaattgagacctatgcagacccgtctatattggaatccctctcttcaagt
caagttgatgaacttaaagaattcaagaataaagaatctgaaacttttcgcaatgaaatg
cgacacgaagtagaagctcgacttaagtcatatgaagaaacatcaagagttgagtacgtt
ccagttcttagattgaaaatatcagatcaaagcccgaatgtgtttggaaccctgtctttg
tggaagccctcacatgagttactttcactcttacatgaagatcgacctttttttattcac
tgtattagtgccaacaaagttttttttgatgaagtaaatctttcctcattaaagtcgacg
gtttttagagaagtttctgaagactttaaaatgaatgattactttggaaaaagtcgatca
ttggcatcgatacttgatattgtgatggacgaatacgattttaaaagtaattttaacgaa
gtagatttggtaggccttgttattcaagtcaacgatcctggaaggtcaaatgaaaaagtt
gttaatagtgcatatggaagtatatacctttcagatcttatgggtaattttgtaagaata
agattttttaattctttgaaggacttgggtatggagactttaattgttccagctcaagta
atatattttcgtaatcttagtttcagaactaaagacttatctctcaaagaaattccttct
ttatttatgaaggaacaaactgaagcatttagctcttcaaatgattctatcgtttcttct
ataattactgagtttatggagagtgcaactccaaactttgtggatgactctgcccgcctt
ttagctacacttttaggtaccgaaataaagtctccttgtggttataataaagataaaatg
tcaatcgggataactccaacttcgaatgaaagagctcaaattgcggatcctcatcttttc
tcaccttcttctacgattgaaattgtttccaattctccagcggcactacaatcttctaga
aatcaatcgaaattacttaagttgaagagtatgaattatgcggatgcatctccgctccta
cctataatacctcttccaaatggaggaacaagcaagtctaattcttatgcaaagttatac
aaggtgcccaagagacgacgttccaagctttcgtttgagcaagaaataagtagtaataga
gagcccagacaggaaagtcaagaatttgaggaggcagctaatttagctatggacaattta
gaaatgtaa
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integrated database retrieval system
