Lepeophtheirus salmonis (salmon louse): 121128476
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Entry
121128476 CDS
T08214
Name
(RefSeq) 3'-5' exoribonuclease 1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121128476
03036 Chromosome and associated proteins [BR:
lsm03036
]
121128476
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121128476
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
121128476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
121128476
NCBI-ProteinID:
XP_040579997
LinkDB
All DBs
Position
13:34070866..34072230
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AA seq
356 aa
AA seq
DB search
MSYNDAGDTSHYMLRGGPPRNKFKKGGKTNLQNTGGGSSMPPEQQKIYQEISKLNGLVDQ
MTIQKVKNRCKDVKIDPRGHNYVVKRRLKEYYKREKLEEAGLAVNRNVHYFVVIDFEATC
EERNPSNYKHEIIEFPAVLISSRTAEVVDTFHEYIRPLINPNLSTFCKNLTGISQKTVNA
SDPFLIVHDKFLNWLENHGLGSKYTFSLVTDGPFDMGRFLYLQTRHSSIAFPEYASKWVN
LRKCFINYYKPSYNNIHKTSTPGLQAMLTSLGMEFEGSPHSGIDDAKNIARIVIRLLKDQ
AYIRVNEKIVLLVESSTYENRSPVNTGGRLQTVMSVKNNEAEQWQENKKKQIKCNV
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtataatgatgcaggtgatacaagtcactatatgctgagaggcggtcctccaaga
aacaagtttaaaaagggtggaaaaacgaatcttcagaacacaggaggtggctcatccatg
cctccagaacaacagaaaatatatcaagaaattagcaaactgaatggtcttgttgatcaa
atgaccattcaaaaagttaaaaatagatgtaaagatgttaaaattgaccctcgtggtcat
aattatgttgtgaagcggagattgaaagaatattataaaagagaaaagctggaggaagcg
ggtctcgccgttaatcgcaatgttcactattttgttgtgatagactttgaagcaacatgt
gaggagcgtaatcctagtaattataaacacgaaatcatagagtttcctgcggttctgata
tcatctcgcaccgctgaagtcgtggatacctttcatgaatacattcgtcctctcattaat
cctaatctgagtaccttctgcaaaaatctcactggaatttcgcagaaaacggttaatgca
agtgatccttttttaatagtgcatgataaatttttaaattggctggagaatcatggttta
ggaagtaaatatacatttagtttagtaacagatggtccttttgatatgggaagattcctc
tatctccaaacccgtcactcttccattgcttttccggaatatgcgtccaaatgggtcaac
ctcagaaaatgttttattaattattacaaacccagttataacaatattcataagacatca
actccaggacttcaagccatgctcaccagtttaggtatggaatttgaaggttctccccat
tctggtatcgatgatgctaaaaacattgcccgaatagtcatccgtcttcttaaagatcaa
gcttacatacgtgtaaatgaaaaaatagtattgcttgtggagtcaagcacttatgagaat
cgttctcctgtcaatactgggggtcgacttcagactgtcatgtctgttaaaaataatgag
gctgaacaatggcaagaaaataaaaaaaaacaaattaaatgcaatgtctaa
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