Lepeophtheirus salmonis (salmon louse): 121128549
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Entry
121128549 CDS
T08214
Symbol
Sur
Name
(RefSeq) ATP-binding cassette sub-family C member Sur
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121128549 (Sur)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsm02000
]
121128549 (Sur)
Transporters [BR:
lsm02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
121128549 (Sur)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
AAA_29
RsgA_GTPase
ATPase_2
AAA_22
AAA_16
AAA_33
nSTAND1
cobW
MobB
AAA_19
AAA_25
AAA_7
AAA
DUF5090
Motif
Other DBs
NCBI-GeneID:
121128549
NCBI-ProteinID:
XP_040580074
LinkDB
All DBs
Position
13:40266266..40394949
Genome browser
AA seq
1892 aa
AA seq
DB search
MSEEEPPIDESLTLCLSQIQRFYYYSILLKEETEKKYSNCVLEFTQISTNTLFCYIVTMI
QVYLMISNSSKNSARSANGSGGICFGLEGINNGPIHARYVSHHFISAIYIFQFIVALFSA
VEVVCFWSKTNIFMAVSFVDSFLFIVSIIASGAYFVSVEKRHLRYSIPLFLHYGANTLIQ
GFCLLENSDFRYIRTWCAFLLSTSYGLQFIFGFIGIIQRLYLRLVSNMDGPVYSKRPVIP
QSHVYLYNEASSFSRLTFWWLNPILTQGYRAPLEIDDLHKLPKEERTKKYFQKLKTLLSR
DKSSILWECITMNWSFVILGGLFRLFADILGYACALSINIIVNSIAAENENASLHLISNV
TINPLKDTRYYDSFFVSELFFDPRVVSIVIFLAALGQGALSQTSNHLLTVSGIRAKNALH
VLLYEKSLKLPVGSSNPMQIHRKINLKPVNDEGKGCMGGSCSLDEDYSNEGNIDIGFITN
LASEDIINIRELIWNVHYIWSLPLKILVLLFLLYDQLGISGVSGAILGTCVILPLQVLTG
KLMSENNKLILCSQDNRLFKSTETLASMKTVKLATMEEWALKRIRCARTKELIFLRRDSF
LWSFMAFLASISTTLVTTLTLGLFVLLEDHNFTAADLFTSMALLSQLTVCLSVVPVTVPI
FIKGKVSTQRLAEFLNRAEVSIYKQNNKLNKHCTYFDDRKDDDEEEEEEEEESEIFIQRA
KRLPETCFTVENGTFAWPKCETNVLQSINLEIKTGSLTIVIGPSGSGKTALISSLIEEMD
RITGSVKWNVPDTVALLGQRPWLLNTTIKDNILLGRPFKEKRYKKVIAACDLQTDIDLLP
HGDDTEIGERGVLLSGGQRQRLAIARCLYSKSYCTFMDAPFSSLDSKITSHVFEEGVLKI
LLKRRRTVFLTTERLDFLHRADHIVALKDGMIKAQGTIQDVTRLCPELLSTKLSKNRLSR
ISDDNKGLVEGKTAQERWKLLRNVTKLGIKVKNKNTPKKKSQLQLNKSDDNFPLEISPVN
SLLIRRHRSHSGGTSSGSSGGSFLFGKSLSQLPSSASSCKLYRSHLRIDSRSQSNLTHDL
LLPSDEYIDYSLTEEEPSFCRVKKLSKINNGNNLFARTLSWNTNSKELSVSTSSSMNRSV
VRRAKTPPNRPSNHAGEFQRMRSFIVNTNKNINLTSNRNAGGRSSLHRDSMVLSNLMPMH
SNSEPEGFITDTVAPLKRRSIVLEPPHNRVMRLTSNSSQISSISGFSDDFFDEEEDEEGL
VYKSQGGQSHENREYGSIDIGVLTVYFKAGGIFLAGFFVILSFVLQSVKVYMDFLLRDWS
MEEKNSDKLIAYFSFYGSLSVIVILISCVANLIGQLIGARARTKLHNDMIQNIMYCPLEL
FEAFPIGRIINRISHDIFIVDQKIPPCIQRLIMLSFVCIAALAVNSIQSPVFLIFALPMI
SIYWWLQHFYRRSSRELQRLDSITRAPVLSHFSDTLSGLITVRAFGEQTRFINELCEKVD
TNTSAFLILQSGCRWLGVYLDAAGAIFVFLSILVNLFFPRKGREVTSSASIGLSVNYSLL
VPIYLAWVVKFAANIENYMNAVERVLEYTHFPSEEEDFSEFQAVHASSMNSSRRSFLLRG
RGKHDEIEEDVRVSGDFLQNDSEGLIIRFNSVCLAPSFEYRRLPGIQQGFSLEIPYRQKV
GICGRSGSGKSTLLMGIVRLSRVLQGSITINGININAIPLSRLRKFVITIPQDAVLFSGT
IRSNLDPENDFSDELIWSTLDKADCGKTVRNFPDGLDTCVTENGDNFSLGQRQELNIVKA
LLRRPRVVILDESTSALDPNREVALHNTLLEAFEDSTLISVAHRLSNIVEYERVLVMGEG
RILEDGNPKELLKKPMGFFSALWRAAGEKPLS
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaagagccacccattgatgaatccctgacactatgtttgagccaaatacaa
cgattttattattactctattctcctcaaagaggagacggagaaaaagtactccaattgt
gtcctggagtttactcaaatatccaccaatacccttttttgctatattgtcacaatgata
caagtatatctcatgatcagcaactcctccaagaactctgctcgaagtgcaaacggctcc
ggaggaatctgttttggtcttgaaggaatcaacaacggcccaattcatgctcgctatgta
tcccatcattttatttctgccatttatatttttcagttcattgtggctctcttttccgca
gtggaagttgtttgtttctggtcgaaaacaaatatttttatggcggtctcatttgttgac
tcatttttattcattgtgtctatcatagcaagtggagcttattttgtatccgttgagaaa
aggcatcttcgctattctattcctttatttttgcattatggcgcaaataccttgatccaa
gggttctgcctacttgaaaatagtgattttcgatacattcgtacttggtgtgccttcctt
ctctcaacgtcttatggacttcagttcatctttgggttcattggaatcatacaaagacta
tacttgagattagtttcaaacatggacggaccagtctactcgaaaagaccagttattccc
caaagccacgtctatttatataatgaagcttcttcattcagtaggctcactttttggtgg
cttaatcccatacttacccaaggatatagagctccgcttgagattgatgaccttcacaaa
ttacccaaggaagagcgaaccaaaaagtattttcaaaagttaaaaactctattgagcaga
gataaatcctctattttgtgggaatgtattacaatgaattggtcatttgttatccttgga
ggattatttcgtctatttgcagatattttgggatatgcctgtgctctaagcataaatatc
atagtcaattcaattgctgcagagaatgaaaatgcaagtctacatttaatcagcaatgtc
acaatcaaccctttaaaagatactcgatattatgattccttttttgtctctgagctattt
tttgatccacgcgtagtgtccattgttatattccttgctgctctgggccaaggtgccctt
tcacagacttcaaatcaccttttaacagtttcagggattagggcaaagaatgctcttcat
gtgcttttatatgaaaaatctcttaaactccctgttggctcctccaatcccatgcaaatc
catcgtaaaataaatttgaaacctgtcaatgatgaaggtaagggctgcatgggtggtagt
tgctctctggatgaggactacagcaacgagggaaatattgacattggcttcattacaaat
ttagcatcagaggatatcattaatattagagagcttatttggaatgttcattatatttgg
tcattgcctctcaagatacttgttcttcttttcctactatatgatcagttaggtatatcc
ggagttagtggagctatactgggaacatgcgttattttaccactccaagttctcactgga
aaactcatgtcagagaataataagcttatactttgcagccaagacaatagactattcaag
tcaactgaaactctggcttcaatgaaaacggttaaactagctacgatggaggaatgggct
ttgaaacgtattcgttgtgctagaacaaaggaactaatttttttgagaagagattccttt
ctatggtcatttatggcatttcttgcgtccatttcaaccacactcgtcacgactctcacc
ctaggactctttgttctattagaggaccataacttcacggcagcagacctctttacatct
atggctctattgagtcaattaaccgtatgcctctcggtagtaccagttacagttccaata
tttattaagggaaaagtctcaactcagagactcgccgagtttttgaaccgagctgaggtt
tctatctacaagcaaaataacaaattgaataaacattgtacatattttgatgaccggaag
gatgatgatgaagaagaggaagaggaagaagaagagagtgagatctttatccagagagcg
aaaaggcttccagaaacatgtttcacagttgaaaatggaacatttgcatggcccaaatgt
gaaacaaatgttttgcaatccattaatcttgagataaagacgggttccttaactattgtc
ataggaccgtccggctctgggaagacagcgctaatatcctcccttattgaagaaatggat
agaatcactggttctgtaaagtggaatgttccagacactgttgctcttcttggacaaaga
ccttggcttttgaacacgaccataaaagataacattttattggggagacctttcaaagaa
aaaagatacaaaaaggtcattgctgcctgtgatcttcaaactgatattgatttacttcct
catggtgatgatacagagataggtgaaagaggtgttcttctctctggtggacaacggcag
agactggccatagcaagatgtctatattctaaatcttactgtacatttatggatgctcct
ttcagctcccttgattctaaaataacatctcatgtcttcgaagaaggagtcttgaaaatt
ctactcaaaagacgtagaactgtatttttaacgacagaaagactagattttcttcatcga
gcagatcatattgttgctctaaaggatggaatgataaaggctcaaggaactattcaagat
gtcactcgtttatgtccagagcttttgagtacaaagttgtcgaaaaatagactatctcga
attagtgatgacaataagggtcttgttgaagggaaaacagctcaggagagatggaaatta
cttcgcaatgtcacaaaactagggatcaaggtaaagaacaaaaacacacctaaaaaaaag
agtcaactgcaattgaataaatccgatgacaatttccctcttgaaatatctccagtcaat
agtcttctcatacgaagacatcgatctcattccggtggtacatcatccggatcaagtgga
ggttccttcctctttggaaagtcattgtctcaactaccttcctcagcttcttcgtgtaaa
ctctatagaagccatttacgaattgatagtcgatctcaatccaatctaactcacgattta
ttactcccatctgatgaatacatcgactattctttaacagaggaagagccctcattttgt
agagtaaagaaattatcaaaaataaataatggaaataatttatttgctcgtactttatca
tggaataccaactcaaaggaactctcagtatctacctcttcatctatgaatcgatctgta
gttcggagagctaaaacacctccaaatcgtccatccaatcatgctggagaatttcagaga
atgagaagcttcattgtgaatactaataaaaatattaatttgactagcaatcgtaatgct
ggaggaaggtcctcgttgcatcgggactctatggtgttaagcaatttgatgcctatgcac
agtaattcggaacctgaaggatttattactgatacagtggcacctcttaaaaggagaagt
atagtcctcgagcccccacataatcgagtcatgagacttacctccaattcttcccaaatt
tcatccatttcaggattttcagatgacttcttcgatgaggaagaggatgaggagggtctg
gtgtacaagtcacaggggggccagtcccatgaaaacagagaatatggatcaattgatatt
ggtgttcttaccgtttacttcaaagcaggagggatttttttggcaggattttttgtgatt
ttgtcttttgttctgcagtcagttaaagtgtacatggatttccttctcagagattggtcc
atggaagaaaaaaattctgacaagctcattgcctacttttccttctatggctctctctcc
gtgattgttattctcatatcttgcgttgctaacctgattggtcagctaataggagcacga
gcacgaacaaagttgcataatgatatgatacaaaacattatgtactgccctcttgagctg
tttgaggcttttcccattggaaggatcattaatcgtatttctcatgatattttcatagtg
gatcaaaaaatccctccctgcattcaaagattgattatgctgagttttgtatgcatcgct
gcactggctgtcaattctattcaaagccctgtgtttcttatatttgccttgcccatgata
tccatctattggtggcttcagcacttttatagacgctcatccagagaacttcaaagattg
gatagtattactcgagcaccagttctgtcccacttttcagacacactaagtgggctcatc
actgttagggcctttggtgaacaaacccgttttatcaacgaactatgcgaaaaagttgat
acgaatacttcagcgtttctcatacttcaaagtggttgtagatggctaggagtttatttg
gatgcagctggagcaattttcgtgtttctctccattcttgtaaacctattctttccacgc
aagggaagagaagtaacttcatctgcctcaattggattgagtgtcaattatagtctccta
gttccaatttatttagcttgggttgtgaaatttgctgcaaacattgagaattacatgaat
gcagtagaaagggttcttgagtacacacactttccatctgaggaagaagacttttccgaa
ttccaggcagttcatgcatcctcaatgaattcatccagacgaagtttcttattaagagga
cgaggaaaacatgacgaaattgaagaggatgttcgcgtttctggagactttttacaaaat
gactcagaggggttgatcatacggtttaattcagtgtgtctagctccatcatttgaatat
agaagactacctgggatacagcagggtttttctttagagataccctatcgtcaaaaggtt
gggatatgtggacgttctggaagtgggaaatctacacttctcatgggaattgttcgtctc
tctcgggttttgcaaggttcgatcacgataaatggtattaacattaatgccatacccctc
tcaagacttcgaaaatttgtaatcacgatccctcaggatgctgttctcttttcaggaaca
attcgaagcaatcttgatcctgaaaatgacttctccgatgagttaatatggtctactctt
gataaggcggactgtggtaaaaccgtgcgaaactttccagacggactcgatacatgtgtc
acagaaaatggcgacaactttagtttgggtcagcgtcaagagttgaacattgttaaagca
cttctaagacgaccaagggttgtcatactggatgaatccacctcagctttagatcccaat
agagaagtagcgcttcataataccctcttagaagcatttgaggactctacattgatctct
gttgctcatcgcctctctaatatcgtagaatatgaacgagtcttagtcatgggtgagggt
agaatattggaggatggaaatcctaaagaacttttaaaaaaacccatggggtttttctca
gcactctggagagctgctggagaaaaacctctttcttga
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