Lepeophtheirus salmonis (salmon louse): 121128685
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Entry
121128685 CDS
T08214
Name
(RefSeq) host cell factor-like isoform X1
KO
K14966
host cell factor 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03083
Polycomb repressive complex
lsm04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121128685
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
121128685
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsm01009
]
121128685
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121128685
03029 Mitochondrial biogenesis [BR:
lsm03029
]
121128685
Protein phosphatases and associated proteins [BR:
lsm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121128685
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
121128685
HMT complexes
COMPASS/SET1 complex
121128685
MLL-HCF complex
121128685
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
121128685
Mitochondrial biogenesis [BR:
lsm03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
121128685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
121128685
NCBI-ProteinID:
XP_040580205
LinkDB
All DBs
Position
13:26744095..26750640
Genome browser
AA seq
1576 aa
AA seq
DB search
MASPILKWKKVSNATGPSPRPRHGHRAVAIKDLMVVFGGGNEGIVDELHVYNTATNQWFV
PPVKGDVPPGCAAYGFVVDGTRILIFGGMVEYGKYSNELYELQASRWEWKRIKPKVPKNG
NPPCPRLGHSFTLIGNKIYLFGGLANDSEDPKNNIPRYLNDLYTLELRPNSNFMTWDIPS
CYGTPPPPRESHSAVAYCDKDGNNPKLIIFGGMSGCRLGDLWILHIDTMTWNKPIVGGIA
PLPRSLHSATLIGHRMFVFGGWVPLVMDDVSTHEKEWKCTNNLTSLNLETLQWEVLSLDV
FDDAVPRARAGHCAVSINNRLWIWSGRDGYRKAWNNQVCCKDLWYLETETPPSPGRVQLV
RASTNSLEVCWGSLPSADAYLLQIQKYDMPPTTTTASSTATAAASTPSAGIISTTAAPQL
PTHPVLPTQPAPISPSMISPIKTQAPTIIRMASTPGLPTTPLPAGTPGTIVRPAGGNIVR
VRTPVGASPGQIKVVSSQGQLIKQATTVSNAGEAPQTITAGAQAIKVLQQPGGQLITQQT
GLKVNPGQQTAIISGQTVRLASPAGGTLLKTGTTLTSPGGKQIILQKQGVGGTQPQIVTL
VKTSQGMQVATMPKASIVQGKSGTQQIIQTQAGKGIPQGATIVKLVNTQGGAGQTAKIVT
NMKTLGTNVMTVAKPGGVPVSGGKQTIVINKPGGIGTLKGPHGQQIIVVTTSGGIKNLPA
ITTTQAGGFIPQVSGSSGQGPVKMIVVSSGQLSQTTSKPITIAVSGHGGAMGKTVTLAGK
HGTVTTAGSQILSTSSGQILAVPAQGMIQSSGISTQQSVSLAGKPVTVQMSSGQKTLTLV
QAPGSGAQQILSGAGQNIITTAGGEAKMVVLQSPATVTTTSHQATAVNIGSTSSSELQPS
TSISTDGPVSSDEALAALAAEAGLMDTSSVPVSSNAVEEASSERGRIALQLSDGTILDPN
TVVTGAQVDGGLITPPNEENSIVEFLDESDLMLQTQVDGDPGEIEDDQSKEKQSEEEVEK
EEGNKEKEKESPKSQLTSDEKATKESSEAPKIPSTTDKEATTKEAAVKEGEEESPSLLSV
PSPPPSSSSCSESERKNKESKEESEKSVDKEMKDMTSPSTTEEDHEEDAMETTSNLEPES
ESNETTTASREKTIDKGGKALSLQSSSSEIIKKSENITPSEKNSDCASNDSPPQENESIK
KDYEEVTVKIEKIFSDPQDEASDESMEEEGSEPCDPLPAYPKVDALATAVAAAVAPVEVF
DLKKEPTDAPATTSISLPTTPVTTAVSTTAADMDGASALAALASAVPTNVKKDLSVENGS
IGTAGASSNGTPIKPVTVPVEQRTKDNSGWFDVGIIKGTSCTVASYYLPSGDSERSTDID
VEGDGNTLKKVELQPGTAYKFRVAGINACGRGMWSEVSAFKTCLPGFPGAPSAIKISKSA
DGAHLSWEPPSASTGDIIEYSVYLAVKSATTSSQGDTKTVSSSPSQLAFVRVFCGASAQC
VVSNNNLAAAHIDTSTKPAIIFRIAARNEKGYGPATQVRWLQDASSPALSGGRTAVKRPA
GDSTNKTLYVTKVPKT
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcccattttgaagtggaaaaaagtgtcaaatgccacgggtccctcgccgcgt
cctcgacatggacaccgagctgtggctatcaaggatcttatggttgttttcggaggcggg
aatgaaggaattgtagatgaattgcatgtctataacaccgctacaaatcaatggtttgta
cctcctgtcaaaggggatgttcctccaggatgtgcagcctatggattcgttgtcgatggt
acaaggattttaatatttggaggaatggtggaatatgggaaatactcaaatgagctctat
gaattgcaagcaagtcgttgggaatggaaaagaataaagcccaaagtacctaaaaatggt
aatccaccgtgtccaagattaggccatagttttacattaattggtaataaaatctactta
tttggaggcttagccaacgatagtgaagatcctaaaaataatatacctagatatctgaat
gacttatatacacttgaattgaggcctaacagcaatttcatgacatgggacataccctct
tgctatgggactcctccaccaccaagagagtctcattctgctgttgcgtattgtgataaa
gatggaaataatcccaagcttatcatctttggaggaatgagtggatgtagactaggagat
ttgtggattctgcatattgatacaatgacatggaataaacctattgttggaggaatcgct
ccacttccacgatctttgcatagtgccacactgataggtcatcgtatgtttgtttttggg
ggctgggttcctcttgtcatggacgatgtttcaactcatgaaaaagaatggaaatgcaca
aataatttaacatccttaaatttagaaactcttcaatgggaagtattatccctagatgtt
tttgatgatgctgttccacgagcacgtgccggacactgcgctgtttctattaacaatcga
ctttggatttggtccggacgagatggctatagaaaagcatggaataatcaagtttgttgt
aaagatttgtggtatctcgagacggaaactcctccatctccaggccgcgttcaattagtt
cgagcttcaactaattccttagaagtttgctggggatcacttccatcggcggatgcttac
ttgcttcagattcaaaaatacgatatgcctcctactactaccacagcatcgtccacagcg
acggcggctgcttctactccatcagctggtatcatatcaactactgctgcacctcaatta
cccacccatccagttcttcccacgcaaccagctccgatttctccttcaatgatttcgccc
attaagactcaagcccctacaattataaggatggcatcaactcccggtctacctaccact
cctcttcctgcagggacaccaggaaccatagttagaccagcagggggaaatattgttcgt
gttcgtactcctgttggggcatctcctggacaaattaaggttgttagttctcaagggcaa
ctaattaaacaagccacaacagtatctaatgctggagaagctcctcaaacaatcacagct
ggagctcaagctatcaaagtgcttcaacagcctggtggacaacttattactcaacaaaca
ggattgaaagtaaatccgggccaacaaactgcaattataagtggtcaaacagttcgatta
gcatcccctgccggagggacacttttaaagaccggaacgactttaacttctcccggtgga
aaacaaatcattttgcaaaagcaaggagttggtggaacacaaccccagatagtgactctt
gtaaaaacatctcaaggtatgcaagtcgcaacaatgccaaaggcctctattgttcaaggc
aaatccggtacccagcaaattatccaaactcaagctggcaaaggaatacctcaaggagct
acgattgtgaagttagtgaatacacaaggtggagcaggccaaacagccaagattgtaacc
aatatgaaaactttaggtacaaacgttatgactgtcgctaaacctggaggagttcctgtc
tctggtggaaaacaaaccatcgttattaataaacctggaggaattggaaccctcaaaggg
ccacatgggcaacaaataattgttgttactacttctggaggaataaaaaatttaccagcc
attacaacgacacaagctggaggtttcataccgcaagtgagtggatcttctggtcaagga
cctgttaaaatgatagtagtcagctctggtcagttatcccaaaccacaagcaagccaatt
actattgcagtgtctggacatggaggtgctatggggaaaactgttacattagcaggaaaa
catggcacggtcacgactgctgggtctcaaattcttagcacgagttcaggacaaatatta
gctgttccagcgcaaggcatgatccagtcaagcggtatatcaactcagcagtctgtaagt
ttagcggggaagcctgttacagttcaaatgtcctcaggacaaaagactcttacattggtc
caagcccctggatctggtgcacaacaaattttgtctggagctgggcaaaatattatcaca
acagctggaggcgaggctaaaatggttgttcttcaatctccagctactgtaacaactacg
tctcatcaagcaaccgctgttaatattggctcaacgtcttcctctgaacttcaaccatca
acttccatatcgactgacggtcctgtatcttctgatgaagcactggcagccctagcagca
gaagcagggttgatggacacttcctcagttcctgttagctctaatgctgtcgaggaggct
tctagtgaaagaggtagaattgctctgcagttgtctgacggaactattttagacccaaac
acggtagttactggagcccaagttgatggaggattgattacaccaccaaatgaagaaaac
agtatagtcgaatttttagacgaatccgatttaatgcttcagacccaagtagacggagat
cctggagaaatagaggatgatcaatcgaaggagaaacagagtgaggaagaggtagaaaaa
gaagaaggaaataaggagaaggaaaaagaatcacccaagtctcagttaacatcagatgaa
aaagcaacaaaagagtcttctgaagctccaaaaatcccttcgaccactgacaaggaagcc
acgaccaaagaagcagcagtgaaagaaggagaagaagaatcgccctcactactgtcagta
ccaagtccaccaccatcatcgtcatcatgttcagagagtgaacgaaaaaataaagaaagt
aaggaagagagtgaaaagagcgtcgataaagaaatgaaggatatgacgtctccctcaact
actgaagaagaccatgaggaggatgcaatggaaactacttcaaaccttgaaccagagagt
gagtcgaatgaaacaacaactgcttcacgggaaaagacaattgacaagggtggcaaagca
ttatctctccaatcttcatcatcggaaattattaagaagtcagagaatattactccttct
gaaaagaactcagattgtgcgtcaaatgatagtcctcctcaagagaatgaaagtataaaa
aaggattatgaagaagtaaccgtcaaaattgaaaagatttttagtgatccacaagatgaa
gcttctgatgaatcaatggaagaggagggtagtgaaccatgtgacccccttccagcttat
ccaaaggtagatgcgttagctacagctgttgctgctgcggtagctcctgtagaagtgttc
gatcttaaaaaagagcctactgatgctccagccacaacttccatctcacttcccacaaca
cccgttacaactgcagtatcaacaactgctgcagacatggatggtgcaagtgccttagct
gcacttgcttcagctgttcccacaaatgtgaagaaggatttgagtgttgagaatggatcc
attggaacggcgggagcttcttctaatggaacgcccattaaacctgttaccgttcctgta
gaacaaagaactaaggacaattccgggtggtttgatgttggaattattaaagggacttct
tgtacagtggcatcatattatttaccatctggggatagcgagcgaagtactgacattgac
gtcgaaggagatggaaatactttgaaaaaggtggaacttcaacctggtacagcttacaag
tttcgtgtggcaggaattaacgcttgtggacgaggaatgtggtcagaagtttccgccttt
aaaacatgtcttcccggtttccctggagctccatcagccattaaaatttccaaatctgct
gatggtgcacatttgtcttgggaacctccttccgcttccactggagatataattgaatat
tccgtctatctagcagttaaatctgccacgacatcatctcaaggagatactaagacagtt
tctagtagtccgagtcagctagcatttgttagggtattttgcggtgcatccgcgcaatgt
gtggtttcaaataacaatcttgctgctgctcatattgacacaagtacgaaaccagccatt
attttcagaattgctgccagaaacgaaaaaggatatggaccagcaacccaagtcaggtgg
ctccaagatgcaagtagccctgcactctccggtggacgaactgctgttaaaaggccggca
ggagattcaacaaataaaacattatatgtgacgaaggttcccaagacttaa
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