Lepeophtheirus salmonis (salmon louse): 121128685
Help
Entry
121128685 CDS
T08214
Symbol
Hcf
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03083
Polycomb repressive complex
lsm04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121128685 (Hcf)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
121128685 (Hcf)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsm01009
]
121128685 (Hcf)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121128685 (Hcf)
03029 Mitochondrial biogenesis [BR:
lsm03029
]
121128685 (Hcf)
Protein phosphatases and associated proteins [BR:
lsm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121128685 (Hcf)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
121128685 (Hcf)
HMT complexes
COMPASS/SET1 complex
121128685 (Hcf)
MLL-HCF complex
121128685 (Hcf)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
121128685 (Hcf)
Mitochondrial biogenesis [BR:
lsm03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
121128685 (Hcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
121128685
NCBI-ProteinID:
XP_040580205
LinkDB
All DBs
Position
13:complement(14919196..14926029)
Genome browser
AA seq
1576 aa
AA seq
DB search
MASPILKWKKVSNATGPSPRPRHGHRAVAIKDLMVVFGGGNEGIVDELHVYNTATNQWFV
PPVKGDVPPGCAAYGFVVDGTRILIFGGMVEYGKYSNELYELQASRWEWKRIKPKVPKNG
NPPCPRLGHSFTLIGNKIYLFGGLANDSEDPKNNIPRYLNDLYTLELRPNSNFMTWDIPS
CYGTPPPPRESHSAVAYCDKDGNNPKLIIFGGMSGCRLGDLWILHIDTMTWNKPIVGGIA
PLPRSLHSATLIGHRMFVFGGWVPLVMDDVSTHEKEWKCTNNLTSLNLETLQWEVLSLDV
FDDAVPRARAGHCAVSINNRLWIWSGRDGYRKAWNNQVCCKDLWYLETETPPSPGRVQLV
RASTNSLEVCWGSLPSADAYLLQIQKYDMPPTTTTASSTATAAASTPSAGIISTTAAPQL
PTHPVLPTQPAPISPSMISPIKTQAPTIIRMASTPGLPTTPLPAGTPGTIVRPAGGNIVR
VRTPVGASPGQIKVVSSQGQLIKQATTVSNAGEAPQTITAGAQAIKVLQQPGGQLITQQT
GLKVNPGQQTAIISGQTVRLASPAGGTLLKTGTTLTSPGGKQIILQKQGVGGTQPQIVTL
VKTSQGMQVATMPKASIVQGKSGTQQIIQTQAGKGIPQGATIVKLVNTQGGAGQTAKIVT
NMKTLGTNVMTVAKPGGVPVSGGKQTIVINKPGGIGTLKGPHGQQIIVVTTSGGIKNLPA
ITTTQAGGFIPQVSGSSGQGPVKMIVVSSGQLSQTTSKPITIAVSGHGGAMGKTVTLAGK
HGTVTTAGSQILSTSSGQILAVPAQGMIQSSGISTQQSVSLAGKPVTVQMSSGQKTLTLV
QAPGSGAQQILSGAGQNIITTAGGEAKMVVLQSPATVTTTSHQATAVNIGSTSSSELQPS
TSISTDGPVSSDEALAALAAEAGLMDTSSVPVSSNAVEEASSERGRIALQLSDGTILDPN
TVVTGAQVDGGLITPPNEENSIVEFLDESDLMLQTQVDGDPGEIEDDQSKEKQSEEEVEK
EEGNKEKEKESPKSQLTSDEKATKESSEAPKIPSTTDKEATTKEAAVKEGEEESPSLLSV
PSPPPSSSSCSESERKNKESKEESEKSVDKEMKDMTSPSTTEEDHEEDAMETTSNLEPES
ESNETTTASREKTIDKGGKALSLQSSSSEIIKKSENITPSEKNSDCASNDSPPQENESIK
KDYEEVTVKIEKIFSDPQDEASDESMEEEGSEPCDPLPAYPKVDALATAVAAAVAPVEVF
DLKKEPTDAPATTSISLPTTPVTTAVSTTAADMDGASALAALASAVPTNVKKDLSVENGS
IGTAGASSNGTPIKPVTVPVEQRTKDNSGWFDVGIIKGTSCTVASYYLPSGDSERSTDID
VEGDGNTLKKVELQPGTAYKFRVAGINACGRGMWSEVSAFKTCLPGFPGAPSAIKISKSA
DGAHLSWEPPSASTGDIIEYSVYLAVKSATTSSQGDTKTVSSSPSQLAFVRVFCGASAQC
VVSNNNLAAAHIDTSTKPAIIFRIAARNEKGYGPATQVRWLQDASSPALSGGRTAVKRPA
GDSTNKTLYVTKVPKT
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcccattttgaagtggaaaaaagtgtcaaatgccacgggtccctcgccgcgt
cctcgacatggacaccgagctgtggctatcaaggatcttatggttgttttcggaggcggg
aatgaaggaattgtagatgaattgcatgtctataacaccgctacaaatcaatggtttgta
cctcctgtcaaaggggatgttcctccaggatgtgcagcctatggattcgttgtcgatggt
acaaggattttaatatttggaggaatggtggaatatgggaaatactcaaatgagctctat
gaattgcaagcaagtcgttgggaatggaaaagaataaagcccaaagtacctaaaaatggt
aatccaccgtgtccaagattaggccatagttttacattaattggtaataaaatctactta
tttggaggcttagccaacgatagtgaagatcctaaaaataatatacctagatatctgaat
gacttatatacacttgaattgaggcctaacagcaatttcatgacatgggacataccctct
tgctatgggactcctccaccaccaagagagtctcattctgctgttgcgtattgtgataaa
gatggaaataatcccaagcttatcatctttggaggaatgagtggatgtagactaggagat
ttgtggattctgcatattgatacaatgacatggaataaacctattgttggaggaatcgct
ccacttccacgatctttgcatagtgccacactgataggtcatcgtatgtttgtttttggg
ggctgggttcctcttgtcatggacgatgtttcaactcatgaaaaagaatggaaatgcaca
aataatttaacatccttaaatttagaaactcttcaatgggaagtattatccctagatgtt
tttgatgatgctgttccacgagcacgtgccggacactgcgctgtttctattaacaatcga
ctttggatttggtccggacgagatggctatagaaaagcatggaataatcaagtttgttgt
aaagatttgtggtatctcgagacggaaactcctccatctccaggccgcgttcaattagtt
cgagcttcaactaattccttagaagtttgctggggatcacttccatcggcggatgcttac
ttgcttcagattcaaaaatacgatatgcctcctactactaccacagcatcgtccacagcg
acggcggctgcttctactccatcagctggtatcatatcaactactgctgcacctcaatta
cccacccatccagttcttcccacgcaaccagctccgatttctccttcaatgatttcgccc
attaagactcaagcccctacaattataaggatggcatcaactcccggtctacctaccact
cctcttcctgcagggacaccaggaaccatagttagaccagcagggggaaatattgttcgt
gttcgtactcctgttggggcatctcctggacaaattaaggttgttagttctcaagggcaa
ctaattaaacaagccacaacagtatctaatgctggagaagctcctcaaacaatcacagct
ggagctcaagctatcaaagtgcttcaacagcctggtggacaacttattactcaacaaaca
ggattgaaagtaaatccgggccaacaaactgcaattataagtggtcaaacagttcgatta
gcatcccctgccggagggacacttttaaagaccggaacgactttaacttctcccggtgga
aaacaaatcattttgcaaaagcaaggagttggtggaacacaaccccagatagtgactctt
gtaaaaacatctcaaggtatgcaagtcgcaacaatgccaaaggcctctattgttcaaggc
aaatccggtacccagcaaattatccaaactcaagctggcaaaggaatacctcaaggagct
acgattgtgaagttagtgaatacacaaggtggagcaggccaaacagccaagattgtaacc
aatatgaaaactttaggtacaaacgttatgactgtcgctaaacctggaggagttcctgtc
tctggtggaaaacaaaccatcgttattaataaacctggaggaattggaaccctcaaaggg
ccacatgggcaacaaataattgttgttactacttctggaggaataaaaaatttaccagcc
attacaacgacacaagctggaggtttcataccgcaagtgagtggatcttctggtcaagga
cctgttaaaatgatagtagtcagctctggtcagttatcccaaaccacaagcaagccaatt
actattgcagtgtctggacatggaggtgctatggggaaaactgttacattagcaggaaaa
catggcacggtcacgactgctgggtctcaaattcttagcacgagttcaggacaaatatta
gctgttccagcgcaaggcatgatccagtcaagcggtatatcaactcagcagtctgtaagt
ttagcggggaagcctgttacagttcaaatgtcctcaggacaaaagactcttacattggtc
caagcccctggatctggtgcacaacaaattttgtctggagctgggcaaaatattatcaca
acagctggaggcgaggctaaaatggttgttcttcaatctccagctactgtaacaactacg
tctcatcaagcaaccgctgttaatattggctcaacgtcttcctctgaacttcaaccatca
acttccatatcgactgacggtcctgtatcttctgatgaagcactggcagccctagcagca
gaagcagggttgatggacacttcctcagttcctgttagctctaatgctgtcgaggaggct
tctagtgaaagaggtagaattgctctgcagttgtctgacggaactattttagacccaaac
acggtagttactggagcccaagttgatggaggattgattacaccaccaaatgaagaaaac
agtatagtcgaatttttagacgaatccgatttaatgcttcagacccaagtagacggagat
cctggagaaatagaggatgatcaatcgaaggagaaacagagtgaggaagaggtagaaaaa
gaagaaggaaataaggagaaggaaaaagaatcacccaagtctcagttaacatcagatgaa
aaagcaacaaaagagtcttctgaagctccaaaaatcccttcgaccactgacaaggaagcc
acgaccaaagaagcagcagtgaaagaaggagaagaagaatcgccctcactactgtcagta
ccaagtccaccaccatcatcgtcatcatgttcagagagtgaacgaaaaaataaagaaagt
aaggaagagagtgaaaagagcgtcgataaagaaatgaaggatatgacgtctccctcaact
actgaagaagaccatgaggaggatgcaatggaaactacttcaaaccttgaaccagagagt
gagtcgaatgaaacaacaactgcttcacgggaaaagacaattgacaagggtggcaaagca
ttatctctccaatcttcatcatcggaaattattaagaagtcagagaatattactccttct
gaaaagaactcagattgtgcgtcaaatgatagtcctcctcaagagaatgaaagtataaaa
aaggattatgaagaagtaaccgtcaaaattgaaaagatttttagtgatccacaagatgaa
gcttctgatgaatcaatggaagaggagggtagtgaaccatgtgacccccttccagcttat
ccaaaggtagatgcgttagctacagctgttgctgctgcggtagctcctgtagaagtgttc
gatcttaaaaaagagcctactgatgctccagccacaacttccatctcacttcccacaaca
cccgttacaactgcagtatcaacaactgctgcagacatggatggtgcaagtgccttagct
gcacttgcttcagctgttcccacaaatgtgaagaaggatttgagtgttgagaatggatcc
attggaacggcgggagcttcttctaatggaacgcccattaaacctgttaccgttcctgta
gaacaaagaactaaggacaattccgggtggtttgatgttggaattattaaagggacttct
tgtacagtggcatcatattatttaccatctggggatagcgagcgaagtactgacattgac
gtcgaaggagatggaaatactttgaaaaaggtggaacttcaacctggtacagcttacaag
tttcgtgtggcaggaattaacgcttgtggacgaggaatgtggtcagaagtttccgccttt
aaaacatgtcttcccggtttccctggagctccatcagccattaaaatttccaaatctgct
gatggtgcacatttgtcttgggaacctccttccgcttccactggagatataattgaatat
tccgtctatctagcagttaaatctgccacgacatcatctcaaggagatactaagacagtt
tctagtagtccgagtcagctagcatttgttagggtattttgcggtgcatccgcgcaatgt
gtggtttcaaataacaatcttgctgctgctcatattgacacaagtacgaaaccagccatt
attttcagaattgctgccagaaacgaaaaaggatatggaccagcaacccaagtcaggtgg
ctccaagatgcaagtagccctgcactctccggtggacgaactgctgttaaaaggccggca
ggagattcaacaaataaaacattatatgtgacgaaggttcccaagacttaa
DBGET
integrated database retrieval system
