Lepeophtheirus salmonis (salmon louse): 121128763
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Entry
121128763 CDS
T08214
Name
(RefSeq) uncharacterized protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121128763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsm03009
]
121128763
Ribosome biogenesis [BR:
lsm03009
]
Eukaryotic type
Pre-60S particles
RNases
121128763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
121128763
NCBI-ProteinID:
XP_040580310
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All DBs
Position
13:1157943..1173135
Genome browser
AA seq
1223 aa
AA seq
DB search
MLPGTNYFKSIDCPFFASGLCERPYCHFLHRRISFNSEPEPALPFVSQPAPHVDAKGHRF
YPQPHDAPVYKPTPKALLATENKPKPYIPSSLAKVAALQKPPSLPRPTLKPREVLGDIGD
LSSSDEESKNPDLIGAILLQGVKSGVLGGEVSEFQHELIKNTYKIKKSKPLKEELEGSIK
KEKDAEVVIVISDDEDAIKEAQRKKAVEEEDRKKRILEDERLEAKRLLEEKEKELEELEK
KRQILENFYGKNDSKKRDPSLENESRYDRKKNKHKSRKRKRSKKKYSRKKSKRRRTSSTS
SSSSSSFSDSSSQSSSSFSSSEESDLEREYRRLHRKRSKHKKSKKHYRDKKISRKREELV
KLKPDHKNLEMTIKKEGLDDTNKLNKISSSVIKKEKGLDPSIIIKNEPAEEVNKPLLEPP
NKEIIPSPSQIKDEDLPESVKSFLDAMEEIDQKIVKDEKSKRSPTCSSEHKDHKSSRSHG
SRKHSHSSSTHKSSNSGKSSKKSSHHDRRSSKSDEKSSHHDRRSSKSDEKSSHYDRRSSK
SDEKSSHYDRRSSKSDEKKQSKSSSAPSSSSSRSSKSKSTPHEIKTSAVLQESIEEPTPG
PSSKSDFSRIEENSSDRDEPRQDYFENSGSEDVFENEDDELKRIFEEHEEQVRKSASSSS
NKKIKSAKDTAHSQNKNVETLNPKSKKRVAHKAETDSSLSRPPIVRKPISATQQMLERYK
KIQNMRENSEIENRLASLVGEDEPPKSKMKSSTAQSKSVNKSRTVVTTTKGTARVSHVPT
VNISKPLIAPDMKSKIPSSIRQRYLDSIVEECCKIYNGDKGNAYARATREEQVCCGRSKN
RNIYLNVVVNCIKKLRTEASQAPKSKQTLVIPQGSMVTSHLQILAGKGGSKGSWSIEKPK
STIDENSPGLTYAILKRYVLSKEDMIENGYPVMNSEIKGKAYITQNPQYSNRKPQPQEPD
KRRCDRCSTIYKVDLQGKQTETGECIYHWGRLYRQRSNRALGPTSGYYCCNGDTNSEGCE
VSQVHITDMEDYNNMRGFVTAFSASEEMNDGNYGIYALDCEMCYTTFCNELTRVTVINYE
GKTVYETMVKPSRDVIDYNTRFSGITQKDLENVTTTIIDVQAVLLSMFSSDTILIGHSLE
SDLKALKMVHSMVVDTSIVFPHKMGPPYKRALKHLAAEHLKRIIQNDVGGHDSAEDALAA
LDLMKVKVKSDVKKLQQDSLKQR
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgctacccggcacaaactacttcaagtccattgactgtcccttctttgccagcggtctt
tgtgaacgcccttattgccactttctacatagaagaatctccttcaattctgaaccagag
ccggctcttccttttgtctcgcagccagctccgcatgtggatgcgaagggacatcgtttc
tatccccaacctcatgatgcacccgtctacaaacccactccaaaggctcttcttgcaaca
gaaaataaacctaaaccttatattccatccagtttggccaaagtcgctgctcttcagaaa
cctccgtctttaccaagacccactctcaagcctagagaagtcttgggagatattggagat
ttgagtagtagtgatgaagaaagcaaaaatccagatttgataggcgctatactattgcaa
ggtgttaaatccggtgtcttgggcggtgaagtatcggaattccaacatgaacttatcaaa
aatacttataaaatcaagaaatctaaacccttgaaggaagaacttgaaggatcgataaag
aaagaaaaagacgcagaagtggttattgtaatctctgacgatgaagacgctattaaagaa
gctcagcgaaagaaagcggtagaagaagaggatcgaaagaaaaggattcttgaagatgaa
agattggaagccaaaaggctccttgaggaaaaagaaaaagaactcgaggaattagaaaag
aagagacaaattttggaaaatttttatggaaaaaatgattcgaaaaagagagatccttca
ttagaaaacgaatctcgatacgatagaaaaaaaaataaacataaaagtcgtaaaaggaaa
cgtagtaagaagaaatattctcggaaaaagtcaaagaggagacgtacttcttcaacgtct
tcctcttcatcctcctcattttcggattcgtcctcacaatcttcgtcgtcattctccagt
tcagaagagagtgatttggaaagagagtatagaagacttcataggaagcgaagcaagcat
aaaaagtcaaaaaaacattacagagataaaaaaatatctcgcaaacgagaggaattggtt
aaattaaagccagaccataaaaatctagaaatgacaattaagaaagaaggattagatgat
acaaacaaacttaataaaatttcgtcctcggtaatcaagaaagaaaaaggtttagaccct
agtatcataataaaaaatgaaccagctgaagaagttaataaacctttactagagcctcct
aataaagagataattccatctccctctcaaattaaggatgaagatcttcctgagtctgtc
aaatctttcttagatgcaatggaagaaattgaccaaaagatagtaaaagatgaaaagtct
aagcgttcaccgacttgtagctctgagcacaaagaccataagtcatctagaagtcatggt
tctcggaaacactcgcactcctcctcgactcataaaagtagtaatagcggtaagtcatct
aaaaaatcttctcatcatgatcgccgaagttccaagtcagatgaaaaatcttctcatcat
gatcgtcgaagttccaagtcagatgaaaaatcttctcattatgatcgtcgaagttccaag
tcagatgaaaaatcttctcattatgatcgtcgaagttccaagtcagatgaaaagaaacaa
tcaaaatcctcttctgcaccatcttccagttcctcaagatcttcaaagagtaagtcaaca
ccacatgaaataaaaacatccgcagttttgcaagaaagtattgaagagcctactcctgga
ccaagttcaaagtctgatttttctagaattgaagaaaatagttctgatagggatgagcct
agacaagattattttgaaaattctggttcagaggatgtttttgaaaatgaagatgatgaa
ttgaagaggattttcgaagagcatgaagagcaagtaaggaaatctgcatcctcatcctca
aataaaaaaattaaaagcgcaaaggatactgcccattctcagaataaaaatgttgaaact
ctaaatcctaagagtaagaaacgagttgcacataaggcagagactgatagttccctctct
agacctccaatagtcaggaaacccatttctgccacacaacaaatgcttgagcgctacaaa
aagatacaaaatatgagagaaaactctgaaattgaaaatcgtttggcatccttggtggga
gaggatgagcctccaaaatctaaaatgaaatcttctactgcccaaagtaaatcagttaat
aaaagccgaacggttgtgactactacaaaaggtacggcacgggtatctcacgtacctacg
gtgaacattagtaaacctttaattgctcctgatatgaaatcaaaaattccttctagtata
cgtcagcgttatcttgatagtattgttgaggagtgctgtaaaatttataatggagacaaa
gggaatgcatatgctcgtgccactagagaagagcaagtttgttgtggtaggagtaaaaat
agaaacatttatttaaatgtagttgtgaattgtattaaaaagctacgaactgaggcatct
caagccccaaaatctaagcaaactttagtaataccccagggatccatggttacatcccat
ttgcagattttggccggaaagggaggttcaaaaggttcttggagcattgaaaaacccaag
tctactattgatgaaaatagccctggcttaacttatgcaattctcaagcgttatgttcta
tccaaggaagacatgatagagaatggatatccggttatgaattctgaaatcaaagggaaa
gcttatataacccaaaatccacagtactcaaatcgaaagcctcagcctcaagaaccggat
aaacgtagatgtgataggtgctccactatttacaaagttgaccttcaaggtaagcaaact
gaaactggtgaatgtatttaccattggggtagactctatagacaaagatctaatagagct
ctgggacccacatcgggttactattgttgtaatggggataccaattctgaaggttgtgaa
gtcagtcaagttcacataacagatatggaggattataacaacatgcggggttttgtgact
gcattttctgcatcagaagaaatgaatgatggcaactatggaatctacgcattggactgt
gaaatgtgttacacgaccttttgcaatgagctaacgagggtcacagtgataaactatgag
ggtaaaacagtgtatgaaactatggtgaaaccctcccgggatgtgattgattataatacg
cgatttagtggaattacccaaaaggatttagaaaatgttacgaccacgattatagacgtt
caagctgtattattatccatgttttcatctgatacaatactcattggtcatagtcttgaa
agtgatttaaaagcattaaaaatggttcattcgatggtcgtcgatactagtattgttttt
ccacacaaaatgggccctccttataaaagggccttgaaacatcttgcagcagaacatctt
aaacgaattattcagaatgacgttgggggtcatgactctgccgaagacgcattggcagcc
ttggatttaatgaaagtcaaagtcaaatcagatgtgaaaaaattacaacaggactcctta
aagcaacgatga
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