Lepeophtheirus salmonis (salmon louse): 121128938
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Entry
121128938 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121128938
Enzymes [BR:
lsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
121128938
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
121128938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
Helicase_PWI
AAA_22
AAA_19
DUF6988
Motif
Other DBs
NCBI-GeneID:
121128938
NCBI-ProteinID:
XP_040580489
LinkDB
All DBs
Position
14:4359237..4368188
Genome browser
AA seq
2166 aa
AA seq
DB search
MSPEPFRVSRFLRNEGSLTRPPPQNGTSVSSEATPASRRSDEWRNLIKTLKKSCDMKELK
ALTTEISGSDSNFDLINETSLDLVCRIYKRISDKFPENSLLTDLKKDYPHITSSQITKLL
RLIRSLNETTQEFSEYFISRENENNKILFGQQLKFSSPLKHFEDTDNIYLDYLTDFSQLN
EFNLDKSLSFNYDHVKSITNGKENNTSFKNAKWLQEKVIQFYGKESEPLGMSIQEFCQTL
LEVITSKKSSDELQNELFELIGFDRIDLISLILEYRDEVTKSERDTKRFLIRELAAATTL
SDAMTEHDKRPMYGCQVLVHSQEEKRLRKQMWKEEKKIGKAMKQMADDEYFEIEESKAAS
RAVLASTIMKPMPVLSTNNDFRKSVSPQPSYPFVFDSKAVVKQTSGFIHGSKIALPVGFE
RKDHKKFEEVYIPASEKAPVDVGKNLIPIETLDDIGQTVFNGIESLNRIQSIVFDTAYNS
SENMLVCAPTGAGKTNVALLCITQTIKNFIDNGIIKKDKFKIVYVAPMKALAAEMTTNFS
RKLSPLGLTVKELTGDMQLTKSEILQTQMLVTTPEKWDVVTRKPGDVSLAQLVRLLIIDE
VHLLHGDRGPVIEALVARTLRLVESSQTLIRIVGLSATLPNYIDVSRFLRVDPFKGLFFF
DGRFRPIPLAQTFIGVKETKALKQSQDMNEICYDKVVEFLRKDKQVMVFVHARNATVKTA
LNLKESAQNHGHAALFEPENTSQLGIAMKALSKSRNKHIMELFQSGIGTHHAGMLRSDRN
IVEKLFSQGLIKVLVCTATLAWGVNLPAHGVIIKGTEIYDAKKSSFVDIGILDVLQIFGR
AGRPQFDKSGHGIILTSHDKLSLYLSLLTNQFPIESNFISLIADNLNAEVSLGTVSTVEE
AINWLSYTYLFVRMRLNPLVYGLTHKQLNDDPLLEEKRREIVIEASQRLDRAKMVRYCER
TSYLNSTDLGRTASHFYIKYDTVEIFNEHLRPIMNEREILTMITKAQEFEQLKVRDEELE
ELDELTRENCEMLPVAGGSENVHGKVNILIQTYISRGYVKSFSLVSDQGYVITNASRIVR
ALFEIVLRKNWPLLAGRLLKLSKMIERQMWDFESALKQHPHMKYEILSKLENRNINLENI
RESNAKDIGHLIHHVKAGIDIKRCAHEVPLATLDAYLQPITRTVVRIRLTITPDFKWNDK
IHGYVGESFWIWVEDPENNFIYHHEYITLTKKQVINIIPMELVFVIPIFEPLPTQYYLRL
TSDKWLGSETVCPVSFKHLILPDHHPPHTDLLDLQPLPVKALNNPKFESLYSFSHFNPIQ
TQIFHSLYHTDKNLLLGAPTGSGKTIAAEIAMFKVFRDYPKGKVVYIAPLKALVKERMSD
WKIRLEKHLGLKVVELTGDVTPDIRAIESSTVIITTPEKWDGVSRSWQTRKYVQNVALIV
IDEIHLLGSDRGPVLEVVVSRTNFISSHTERNLRIVGLSTALANARDLADWLNIDKVGLY
NFRPSVRPVPLEVHINGYPGKHYCPRMATMNKPAYQAIRMHSPYKPSLIFVSSRRQTRLT
ALDLISYLAAEDDPKMWLHLGGDEMEQITRHSIKDLNLRLTLAFGIGFHHAGLVENDRKI
VEELYVNQKIQVLIATSTVAWGVNFPTHLVIIKGTEYYDGKTKRYVDMPITDVLQMMGRA
GRPQFDDVGVACVFVHDVKKNFYKKFLYEPFPVESSLLGALPDHLNAEIVATTISTKQEA
LDYITWTYFFRRVIRNPAFYGLEGVDDSNFNSFLTEIIDKAIIVLQNYGCLDNSHENESV
LSASFLGKVASYYYLSHETVGLLKDTIKGDMSIDDVLGTLSDVKEYSELPVRHNEDTINT
DLAANLPCNLSRLAMESPHTKVRILLACHFSRQPLPNSDYNTDTKSVLDQSIRILQAMID
ISADFGYLSSTLVIQTFMQMVVQARWDSDNATCILPYMESRDEVFFKNVPGGGLPGTIHC
YKGDFNGLSKTLKGAAHLDEAKIREIHTILSNLPMMTVNLSLKDSRGNIFPVGEDWIEVA
TDEEYLLCLEIKRTTRSRKHAFAPKFPKLKDEGWFLVLGDTEACIGGELVALKRCMVASK
DKRDQLTFYTPVNPKRLILTLYIMSDTYLGLDHQYDIKLEAVGGKKTEFIEDDHLYRQFG
SIGLNP
NT seq
6501 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccgagccatttagagtaagtcgatttcttcgaaatgagggatctcttactcgg
ccacctcctcagaatggaacctctgtctcatccgaagcaactcctgcttctagaaggagc
gacgaatggcgaaatctcatcaaaacactaaagaaatcctgcgatatgaaagaattaaag
gctcttacaacagagatatctggctccgattccaactttgatctcatcaatgaaacctcc
ctagacctcgtttgccgaatctacaagcgtatttccgacaaatttcctgaaaattccctt
ttaacagatttgaaaaaggattacccccatatcacatcctctcaaataacaaaattgcta
cgcttaattcgctctcttaatgaaactacacaggaattttcagagtatttcatttctagg
gaaaatgagaacaacaaaatcttatttggacaacaattaaaattctcttctcccctgaaa
cattttgaagatacggataatatctatttagattatttgacagacttctcccaattgaat
gagtttaatttagacaaatcactgtccttcaattatgatcatgttaaatccattacgaat
ggcaaagaaaacaacacctcattcaaaaacgcaaaatggcttcaagaaaaggtaatccaa
ttctatggaaaggaaagtgaacctctaggtatgtctattcaagagttttgtcagacgttg
ctagaagttattacttctaaaaagtcatcagacgaattacaaaatgagctctttgagctt
ataggatttgataggattgatctcatttccttaattttggagtatcgtgacgaagttaca
aaatctgaaagagacaccaagagatttcttataagagaacttgctgctgccactacgtta
tctgatgcaatgactgagcacgacaagcgacccatgtatggttgtcaggttctggttcat
tctcaagaagaaaagagacttcggaagcaaatgtggaaggaagaaaaaaagattggtaaa
gccatgaaacaaatggctgatgatgaatactttgaaatagaagaatcaaaggctgcatct
agagccgttcttgcctcaacgataatgaagcctatgcctgtcctttcaacaaataatgat
tttagaaaatctgtttcgcctcagccaagctatccatttgtttttgattctaaggcagtt
gttaaacaaacttcaggatttatccatggctctaaaatagctctccctgttggttttgag
cgcaaagatcacaagaaatttgaagaggtctatattccagcatcagaaaaagctccagta
gatgttggtaaaaatcttattcccatcgaaactcttgatgatattggacaaactgtattt
aatggtattgaaagtctgaatcgtattcagtctattgttttcgatacagcatataactct
agtgaaaacatgcttgtttgcgctccgactggagcgggtaagactaatgttgctctactg
tgtattactcaaacaattaaaaatttcattgataatggaataattaaaaaggacaagttc
aaaattgtatatgtggcgccaatgaaggccttagcagctgaaatgacaacaaacttctca
agaaaactttctccattaggcttaacggtaaaggaattgactggtgatatgcaattaact
aaatctgaaattcttcaaacgcaaatgcttgtaactactccggaaaaatgggatgtggtt
acacgtaaacctggtgatgtgtctctggctcagttagttcgtctattaattattgatgaa
gtgcatttacttcatggagatcgaggtcctgttattgaagctctagttgcaagaactctt
cgtttagtggaaagctctcaaacacttattcgtattgttggactctccgctacattgcca
aactatatagacgtgtctcgttttttgagggttgatccgttcaaggggctatttttcttt
gatggaaggtttagacccattccccttgctcaaacttttattggtgttaaagaaactaaa
gcattaaaacaatctcaagacatgaatgaaatatgttatgacaaagtcgtagaatttcta
agaaaagataaacaagtcatggtgtttgtacatgctcgcaatgctactgttaaaactgca
ttaaatctgaaagaatctgctcaaaatcatggacatgctgctctctttgaacctgaaaat
acttctcaacttggtattgcgatgaaagctctaagtaaatctcgtaacaagcacatcatg
gagctctttcaatcgggtattggtactcatcatgcaggaatgctgcgatccgatagaaat
atagttgaaaagcttttttctcaaggattaattaaggttttggtatgtactgccaccttg
gcttggggagttaatttaccagcccatggagtaattattaaaggaactgaaatttatgat
gctaaaaaaagtagtttcgttgatattggtatattagatgttttacagatatttggccga
gctggaaggcctcaatttgataagtctggacacggaatcattttaacttcacatgataaa
ctctccctatatttgtctcttttaacgaatcagtttcctatagaatcaaactttatatct
ctgattgctgacaatttaaatgccgaagtttcactaggaacagtatctacggtagaagaa
gctataaattggctttcctatacttacctttttgtacgaatgagactcaatcctctcgtg
tatggacttactcataagcaacttaatgatgatccacttttagaagaaaaacgtagagaa
attgttattgaggcatctcaaaggctggatcgtgcgaagatggtgagatactgtgagcgt
accagctatctgaactctactgatttgggtagaactgcttcacatttttatattaaatat
gatactgtcgaaatattcaacgaacatttgagacctataatgaacgaacgagaaatattg
acaatgataactaaggctcaagaatttgagcaattaaaagttagagatgaggaattagag
gaattggatgaattaactcgagaaaattgcgaaatgcttcctgtagcaggtggctcagaa
aatgttcatggtaaagtgaacattttgattcaaacgtacatttctcgtggatacgttaaa
tcattttcactcgtatcggatcaaggatatgtcattacaaatgcctctagaatcgttaga
gcactatttgaaatagtattacgtaaaaattggcctcttctggctggccgtttacttaaa
ctttccaagatgattgagcgtcaaatgtgggactttgaatcagcattgaagcaacatccc
catatgaagtacgaaattcttagcaaacttgaaaatcgaaatattaatttggagaacatt
cgtgagagcaatgcaaaagatattggccatctgatacatcatgtcaaggcaggcatcgat
attaaacgttgtgcccatgaagtcccattagccactttggatgcttatttacaacctatt
acaagaacagttgttcgaatcaggttgacaataactccagattttaagtggaacgacaaa
atacatggctatgtgggagaatcattctggatttgggttgaagatccagaaaataatttt
atttatcatcatgagtacattacgcttactaaaaaacaagtgatcaatatcataccaatg
gaactagttttcgttattcctatttttgaacctcttccaactcagtattaccttcgactc
acttctgataaatggttaggtagtgagactgtatgtccagtatcatttaaacatcttatt
cttcctgatcaccatccacctcacacagatctgttagatctacaacctttgcctgttaaa
gctctcaataatccgaaatttgagtctctttactcatttagtcatttcaatcctatccaa
actcaaatatttcattccctttaccatacagataaaaatttgttacttggtgctcctact
ggatctggtaaaaccattgcggctgaaattgccatgtttaaagtttttagggattatccc
aagggcaaggttgtatatattgcccccctaaaggctcttgttaaagaacgtatgtctgat
tggaaaattcgacttgagaaacatcttgggctaaaagtcgtggaattaactggtgacgta
actccagacattagagcaattgaatcatctactgttatcataacaacccctgaaaagtgg
gacggtgtttcccgatcttggcaaacgcggaagtatgttcaaaatgtagcccttattgtt
attgatgaaatacatcttttgggttctgaccgtggtcctgttttggaagtagtcgtttct
cgaacaaattttatatcctcacatactgaacgaaaccttagaatagttgggttgtcgaca
gcattagctaatgcaagagatcttgcggattggctaaatattgataaagttggattatat
aattttcgcccttctgttcgtcctgttccattggaagttcacattaatggttatcctgga
aagcattattgccctcgaatggctactatgaataaaccagcttatcaagctatccgtatg
catagtccttataagccctccttgattttcgtatcatcaagaagacaaactagactaaca
gcattagatttaatttcctacttagctgcagaagatgatcctaaaatgtggttacattta
ggaggagatgaaatggaacagatcacaagacattctataaaagatttaaatttgcgactc
acactcgcctttggaattggatttcatcatgccggtttagtagagaatgacagaaagatt
gtcgaagaattgtatgtaaatcagaagatacaagtattaatagcaacatcaaccgtggct
tggggtgttaattttcctacacatcttgttataattaaaggtacggaatattacgatgga
aaaaccaagcgatatgttgatatgcctataactgatgttcttcaaatgatgggtagagca
gggcgtccacaatttgacgatgttggagtggcttgcgtttttgtgcatgatgttaaaaag
aatttctataaaaagttcttatatgaacctttccctgttgaatctagccttttaggtgct
ttacctgatcatttaaacgctgaaatagttgctacaactatttctacaaaacaagaagct
ttagattacatcacatggacttatttttttagaagagtcattcggaatccagctttttat
gggttggaaggtgttgatgattcgaattttaattcttttttgactgagattattgataaa
gctattatcgttcttcaaaattacggctgtttagacaactctcatgaaaacgaatctgtt
ttatctgcgagtttcttgggaaaagttgcttcttactactatttgtctcatgaaactgtt
ggccttctaaaagatactattaagggtgatatgtccattgacgatgttcttggtacgtta
agtgatgttaaagagtattctgagctacccgttcgacataatgaagacactattaacacg
gaccttgccgctaatctaccttgcaatttgtcccgacttgcaatggaatcacctcatact
aaagttagaatattactggcttgtcacttttctagacaacctcttccaaattctgattat
aatacagacacaaagtctgtccttgatcaaagtattcgtatattgcaagccatgatagat
atttctgcggattttggatatttatcttcaacattagtgatacaaacttttatgcaaatg
gttgttcaagctcgatgggacagtgataatgcaacatgcatattaccttacatggaatct
cgagacgaagtttttttcaaaaatgttccgggaggaggtttgcctggcaccattcactgt
tataaaggagattttaatggactttcaaagacattgaagggagcagctcatttggatgaa
gcaaaaatacgtgaaatacacacgatcctttccaacttacctatgatgacagtaaattta
agtttaaaggactctcgtggtaatatattccctgttggagaagattggattgaggttgca
acagatgaagagtatttattatgtttggaaattaagagaacaacgagaagccgcaaacat
gcatttgctccaaagtttccaaaactaaaagatgagggatggttccttgtattgggtgat
actgaggcatgtataggtggagaattagtggctcttaagcgatgtatggttgcatcaaaa
gataaacgtgatcaactaaccttttatacaccagtcaatccgaagagattaatactcacg
ctttatataatgtcagatacataccttggactagaccatcagtatgatataaaattggaa
gctgttgggggaaagaaaacagagtttattgaggatgaccatttgtataggcaatttgga
agcattgggctaaatccttga
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integrated database retrieval system
