Lepeophtheirus salmonis (salmon louse): 121128964
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Entry
121128964 CDS
T08214
Symbol
SA1
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121128964 (SA1)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121128964 (SA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
DUF2525
WipA_N
Motif
Other DBs
NCBI-GeneID:
121128964
NCBI-ProteinID:
XP_040580520
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All DBs
Position
14:complement(28330072..28334766)
Genome browser
AA seq
1185 aa
AA seq
DB search
MNRGKRIRLDTSGGDDGGDDDGFDPTEFYKKQQKEMLLKASLHVRASKLEIQEAQKEADQ
APRYHSIPSTTTNSAVPEGGRRSRSAANAAKAAMSMMNETDMDEVVFGNRRKDPATPAAV
IIPTARTPSSRARGRGRPRPRISSTSPEEILRVRKKGSKGRPVTEITEDESSLYYIIRNT
KASLQQVVDDWIDNYKEEKDKALLSLMQFFISASGCRGTITPLMQSSMEHTDIIRCMTEE
FEEESGEYPLVTAGQFWKKFRGNFCEFIQLLVKQCQYSIIYDQHLMDNIISLLTQLSDSQ
VRAFRHTATLAAMKLMTALVDIALTVSINMENTQRQYDAEQQKTRDKRATNRLETLMTRR
KELEENTEEIKNMLTYMFKSVFVHRYRDTLPEIRSICMFEIGQWMKKYHQQFLDDTYLKY
IGWTIHDKVGDVRLKCLQTLQPLYSSEELKGKLELFTSKFKDRIVSMTLDKEFDVAVEAV
RLVISIYRHHRDMLSDKDCENVYELVYSSHRAVAQAAGEFLNERLFSPDNEIDPDVRTKR
GKKRLPATPLIRDLVEFMIESELHEHGAYLVDSLIESNSMMKDWECMTDLLLEEPGPKEE
ALENRQESSLIEIMVCCIRQAATGDHPVGRGPTRKILSAKEQKLLQEDKQSLTAHFIQTL
PHLLRKYAPDAEKVSNLLVIPQYFDLEIYTTSRQEKNLEALLQTIKELVEKHYKKEVLEA
TAVTLHHLCDEQYAIFTKCSVHRSTILEMVATGYKYAIDEYMNLIAVNDEPNDDDRFHLV
SSLRKVESFYSCHNMSQYNIWESMFSTTVKYKDSMIQDGGNKLLNMPTEAVKSALNACFY
GLISDQNYLETASGRESTVSDVEALLDRLNRYMTCMKEILSSGTNVMLKEEAFTSVCDLL
IMFQVASKNSVLSSLIYRADKEMWLLLNKFIQEHVFIHEDNSEMDQDDHAKIEELHKKRN
FLAGFCKLIVYNSLPTKTASDVFRHYVAFYDEYGDIIKTTLGKVRENNKVNCAKAMVKAL
HTQIQEIQQLQDTLHIDTNTVEFHALKELAKRFALSFGLDALKNREAVAQLHKESILISA
HLENTEDATGPPPNLSFLEIAAEFSNKLLKQDKKVILNYLDKRMSMGMPSSAREDWQPLL
VYRNSLLHGEGEMPIIPSKKPYSRKKRGYEDDDENNDEGSDPDYF
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgggggaaacgtatccgactggatacgtccggaggagacgacggaggagatgac
gatggattcgatcctacagagttttacaagaagcaacaaaaggaaatgttgctcaaagcc
tcgctccacgtccgcgcctccaagttggagatccaagaggctcagaaggaagcagatcaa
gccccacgctatcacagcattcccagcaccaccaccaatagcgcagtaccagaaggcggg
cgaagatctcgttctgccgccaatgcggctaaagcagccatgtccatgatgaatgagacg
gacatggacgaagttgtttttggtaatcgccgtaaagacccagcgaccccagcagctgta
ataatcccaaccgctcgaacgccgagcagtcgagcccgaggtcgtggtcgtcctcgtccc
cgaatatcctcaacctcccccgaagaaattctccgagtgcgaaagaaaggatctaaagga
aggcccgtcacggaaatcacggaggatgagtcttccctttactacattatccggaatacc
aaagcctccttgcaacaagttgtggatgattggatcgataattataaggaagaaaaagac
aaagcacttttgagcctaatgcagttttttatcagtgcttcgggttgccgtggaactatt
acaccgctcatgcaatcctcaatggaacatacggacattattcgttgcatgacggaagag
tttgaagaagagtctggagaatatccactggtgactgcgggtcagttttggaagaaattt
cgtgggaatttttgtgaatttattcagcttcttgtgaagcagtgtcaatattcaattatt
tatgatcaacatcttatggataacatcatatctcttcttactcagttatccgattctcag
gttagagcctttcgtcacactgctactttagctgctatgaagttaatgacggcgctcgtt
gacattgctctgacagtttccattaatatggaaaatactcaaagacagtacgatgcggag
caacaaaaaacgagggataagcgggccacaaatagattagaaacccttatgacacgacga
aaagaattggaggaaaataccgaggagattaaaaacatgctcacgtacatgttcaaatct
gtatttgtacatcgttatagagacacgctgccagagattcgctctatatgtatgtttgag
attggacaatggatgaaaaaatatcatcaacaatttctggatgatacctatttgaaatat
attggatggactatccatgataaagttggagatgtgagacttaaatgcttgcaaacgctt
cagcctctttatagcagtgaggaattaaaagggaaattggagctttttacaagcaagttt
aaggatcggattgttagtatgacattggataaggaatttgacgtagcagttgaagctgta
agacttgttatatccatatatcgtcatcatagagatatgttgagtgacaaggactgtgaa
aatgtatatgaattggtttactcatctcatagagcagttgctcaagctgctggagaattt
ctaaatgagcgtctcttttccccggacaatgaaatagatccagatgttcggacaaagcgt
ggtaagaagagacttccagcaactccccttattcgagatttggttgagtttatgatagag
tctgaacttcatgaacatggtgcatacttggtcgactcacttattgaatctaattcaatg
atgaaagactgggaatgcatgactgatttattattagaggaacctggtccaaaggaggag
gctttggaaaatagacaagaaagctctttaattgaaataatggtctgttgtatccgtcaa
gctgcaacaggagatcaccctgttggtcgaggtcctactcgaaaaattctttctgctaag
gaacaaaagttgctgcaggaagataaacaaagcctaaccgctcattttattcaaacttta
cctcatctacttagaaaatatgcacctgatgcggaaaaggtctctaatttgctagttatt
cctcaatattttgatttggagatttacacaacttcaaggcaagaaaagaacttggaagct
ctacttcaaacaattaaagagttagtagagaaacattacaaaaaagaagttcttgaggca
actgccgtcaccttgcaccatttgtgtgatgaacagtatgccatatttacaaaatgcagt
gtacatcgaagcaccattttagagatggtagcaacaggctataaatatgcaattgatgag
tatatgaatctgattgctgtgaacgatgaacctaatgatgatgatcgatttcatctcgtc
tcaagtcttcgaaaggttgaatcattttacagttgtcacaacatgtctcagtataatata
tgggagagcatgttttctacaacagttaagtataaagactctatgatccaggatggaggc
aataaattgcttaatatgcctactgaggcagtgaaatccgctttaaatgcctgcttttac
ggtttaatttctgaccaaaattacttagaaactgcctcgggtagagagtcaacagtttcg
gacgtagaagcattattggatcgcttgaatcgatacatgacttgtatgaaagaaattctc
tcctctggaaccaatgttatgctcaaagaggaggcattcacatcagtttgtgatcttctg
atcatgtttcaagtagcttctaagaattccgtactatcgtctttgatctacagagcagat
aaggagatgtggctgcttctaaataagttcattcaagagcatgtattcattcatgaagat
aacagtgaaatggatcaagatgaccatgctaaaattgaggagttgcacaaaaaaagaaac
ttccttgcgggtttctgtaagttgatagtttacaattcccttccaacaaagacagcatct
gatgtgtttaggcattatgtcgctttctacgatgaatatggcgatatcatcaaaacgacc
cttggtaaagtaagagaaaacaataaagtaaattgcgccaaagctatggtaaaggctctc
cacactcaaatccaagaaatccaacaattgcaagacaccctacacattgatacaaatact
gttgaatttcacgcattaaaggaattggccaaaaggtttgctctttcttttggattagat
gcactgaaaaaccgcgaagctgtggcccaactacataaagaaagtatcttaatatccgct
catttggaaaacacggaagatgcaactgggccaccaccaaatctttctttcttagaaatt
gctgcagagttctctaacaagcttcttaaacaagataaaaaagttattctcaattatttg
gacaagagaatgagcatggggatgccatccagtgcaagagaagactggcagcctctcttg
gtttaccgtaattctctactccatggtgagggggaaatgcccattattccatctaaaaag
ccttactcacgcaaaaaaagaggctacgaagatgatgacgaaaataatgatgagggctca
gacccagattatttctaa
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