Lepeophtheirus salmonis (salmon louse): 121129039
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Entry
121129039 CDS
T08214
Name
(RefSeq) RNA-binding protein squid
KO
K03102
squid
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121129039
03041 Spliceosome [BR:
lsm03041
]
121129039
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121129039
Spliceosome [BR:
lsm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
121129039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RBD_AKAP-17A
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
121129039
NCBI-ProteinID:
XP_040580639
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All DBs
Position
14:7953421..7955961
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AA seq
223 aa
AA seq
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MEPQDLSDEDRKIFVGGLCWETGEVQLKEYFSQFGEIESANLKLNSVTGKSRCFAFVLFK
ETESVSKVLQNTHAINSKKVDVKRAKAKPGKVFFGGLHPESPSEEELKEYFSHFGNILEF
EIPQDKIKNERKSFGFVTFEKEESMKKVLKVGKVSLAHCELDLRRANPKIGRMKSDYYYY
PSHSYYPDYYSDYDYYSGNGGPGGGGKMKSKVQSSTATPVSPY
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggaaccacaagacttatccgatgaagatcgaaaaatatttgttggaggtctctgctgg
gaaacgggagaagttcaactaaaagaatatttttcacagtttggagaaatagaatccgca
aatttgaaattaaattcagtcacagggaaatccagatgtttcgcctttgttctatttaag
gaaacagagtccgtttccaaagtcctacagaacacacacgccattaattctaaaaaagtg
gatgtgaaaagagccaaagccaaacctggcaaagtattctttggtggacttcatccggaa
tctccttcagaagaagaactaaaggaatacttttcacactttggaaatatcttggagttt
gaaatcccccaagataagattaagaacgaaaggaaatcctttggtttcgtgacttttgag
aaagaagagtccatgaaaaaagttttaaaagttggaaaagtgagtttagctcattgtgaa
ttagatttacggagagcaaatcccaaaataggtcgaatgaaatctgactactactactat
ccctctcattcctactaccctgactattattcggattacgattattactctggtaatgga
ggccccggcggaggagggaaaatgaagtccaaagttcaatcctctacagccacacctgtc
agcccgtactaa
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