Lepeophtheirus salmonis (salmon louse): 121129074
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Entry
121129074 CDS
T08214
Name
(RefSeq) ATP-dependent DNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsm01009
]
121129074
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsm03009
]
121129074
Enzymes [BR:
lsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121129074
Protein phosphatases and associated proteins [BR:
lsm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121129074
Ribosome biogenesis [BR:
lsm03009
]
Eukaryotic type
Pre-60S particles
Helicases
121129074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SNF2-rel_dom
DUF1198
HTH_25
Motif
Other DBs
NCBI-GeneID:
121129074
NCBI-ProteinID:
XP_040580679
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All DBs
Position
14:complement(13944692..13946969)
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AA seq
656 aa
AA seq
DB search
MTTMDETTGEDGIRIHFRTPEKITKPKSSEDISSPSATESNIKEKSIPSKKPGSSNNQEV
ISGLFTGNPNIPSLDNLGNSKDSLPQESLFSQSQFDGHGIHPYIIKNLDSMGISRPTAVQ
SATIPRILAGKDVLVKSQTGSGKTLAYALPLLHSLQAITPQIHRDSGLYALIVVPTRELA
LQTHEWFVKLVRSFARIVPGVLHGGEKRKSEKARLRKGLNILVSTPGRLLDHIHKTKTLD
LSKIHYLVFDEADRMLDLGYERDVNDIINAISENSSEEIKRQTILLSATLTQGIRQLSEV
SLKHPDYVDITSTDGNSVMAISDDLQVDTAVPENLQQTFIVVPAKLRLITLSSFILWKCG
GKSMKKILIFLATQDMVDYHHTLFEQSLYSEEGKNIKFMKLHGNMDQGERTKVFNDFREI
DSGVISSGLVLLCTDVAARGLDLPKVDWIVQYNPPISTADYVHRIGRTARIGLKGSSLLF
VLPSETGFLHEVENQKLARFVELTVDRVLEKVFPSDKRRSLEQAATNLQLKMETLIVEDS
QLKEMGSQAYVSFIRSYASYPKEVRHLFCFKDLHLGHIAKSFGLRDAPTKITGIGKSGNW
LKKQELRKKNAFIKREDRVVKSQRKRIDQRALIMSEYSSGFDDMDEKPPSKKRHKK
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccatggacgagacgactggtgaggatgggattcgaatacatttccggactcca
gagaagattacgaaacccaagtcctccgaagatatttcttctccatcagctacagagtcg
aatataaaggagaaatccatcccttcgaagaagccaggaagctcaaataatcaggaagtt
atatcggggctcttcactgggaatcctaatatcccgtctcttgataaccttggaaattca
aaggactccctccctcaagaatcccttttctctcaatctcaatttgatggacatggaatc
catccctacataatcaaaaaccttgattcgatgggtatatcgcgtccaacagctgtacaa
tctgctacaattccaagaattcttgctggaaaagatgtgctggttaaatcccaaacaggg
agtggtaaaaccctcgcgtacgcccttccattacttcactccctccaagctattactcct
caaatccatcgtgattctggattgtacgctcttattgtcgtacctactcgagaattagca
cttcaaacgcatgaatggtttgtcaaactcgttcgaagtttcgctcgaatcgttccaggg
gttttacatggtggagaaaaaagaaaatctgaaaaggcacgattgcgcaaaggcttaaat
atcttggtgtctacaccaggacgattgttggaccatattcacaaaacaaagacgttggac
ctatcaaaaatacattacttagtttttgatgaagcggatcgaatgttggatttgggatat
gagagagatgttaatgatattataaatgcaatcagtgagaattcttctgaagaaataaaa
aggcaaactattttattatctgctacactcacacaagggattagacaattgtcagaagtg
tctttaaagcatccagattatgttgatattacatctaccgatggaaattctgtaatggct
atatctgacgaccttcaagttgacacggctgtgcctgaaaatcttcaacaaacatttatc
gtagtaccagcaaagcttcgccttatcacgttatcttcttttattttatggaaatgtgga
ggaaaatccatgaaaaagattttgatatttcttgctacgcaagatatggtagactatcat
cataccctatttgaacaatctctttattctgaagaaggaaaaaacataaaatttatgaaa
ttgcatggtaacatggaccaaggagaacgaacaaaggttttcaatgactttagagaaatt
gatagtggcgttatatcatctggacttgtactactatgcactgatgttgctgcaagagga
cttgaccttccaaaagtggactggatcgttcaatataaccctcccatttccacagcagat
tatgttcatcggattggtcgaacggctagaataggtttgaaagggtcatctctattgttt
gttttaccaagtgaaactggatttctacatgaagtagaaaatcagaaattggcacgtttt
gtagaattaacggttgacagagttttagaaaaagtgtttccatcagataaacgcagatcg
cttgaacaagcagcgactaatttacagttaaaaatggaaactttgatagtggaagattcc
caactaaaggaaatgggttctcaggcctatgttagttttattagatcatacgcgtcttat
cctaaagaagtcagacacttattttgcttcaaagatctacatttaggtcacattgctaaa
tcttttggacttagagatgcacctacgaaaataactggaattggtaaaagtggaaattgg
ttgaagaagcaggaattgcgcaagaaaaatgcatttatcaagagagaagacagagtcgtc
aagtctcagaggaagcgtattgatcaaagagctcttattatgtcggaatattcctcaggc
tttgatgacatggatgaaaagcctccttcaaaaaagagacataaaaaatga
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