Lepeophtheirus salmonis (salmon louse): 121129111
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Entry
121129111 CDS
T08214
Name
(RefSeq) irregular chiasm C-roughest protein-like
KO
K25874
Kirrel/Neph family protein
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsm04515
]
121129111
Cell adhesion molecules [BR:
lsm04515
]
Immunoglobulin superfamily
Kirrel/Neph family
121129111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
V-set
C1-set
V-set_CD47
PKD_3
Protocadherin
FAM176
EphA2_TM
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
121129111
NCBI-ProteinID:
XP_040580724
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All DBs
Position
14:37372310..37396998
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AA seq
789 aa
AA seq
DB search
MSLRYCIYLLISSVCLLIPGSLSLTSPRSGSGEQSFIREPSDQIAIVGEHVTLPCRVVNK
KGELQWTRDGFGLGVERNLTGFSRYHMIGSDEEDDWTLDINPVDLEDDAEFQCQVGAAEN
TPPIRSRDAVLTVLVPPSKPIIHPSGDFLRTVEGKGVEIVCESRGGKPAAEITWFDSQNE
VVREGVQTFQELAEDGKRFNTKSILKFVAKAESHHEKNFTCQAQNSADRQPHSVSINLQV
HYPPKVNLQQTDPMIKEGSSAKFSCNAHANPSQMSYNWYISGKLVPEAKKRDYIINSVDR
RLHNAIIRCDVTNSIGKTVQAAKLNVSYPPLFLTRPESSSGSPGENVQLSCRVDSNPKAL
YQWYHKSFLVGHSENITIKVDERQTGEYVCKAFVPGYEDITASAMLYMKQSPIIRNGNRF
ESGAVGETGSFSCSGLSVPPAKYVTWFFNGAKINIHSEKYTIQDKLSSNELESTLIIKKI
DEKDFGSYSCTVSNDLGEDTDIMHLRKRSALPLLVIMAAVIGGVILTIAVIMIVVLCRRS
STSSNKKLNNLLTIHRTVIKGNHNNNSSTSADEISNNSSEMNKVEVRTSSSLSQEECWGE
RSEDSYKNPPLSVSPPLQGVGGGDINSYNTQTQRIILQKPTSIDVVDSMNYRDTYGSGIA
HLNGGYTSNNASSSPLMKSNDNIFSSSAHPSSYYANTKYTHPTSSGNNGVVGSSGSGYHH
GGGQHGGFDYIIPPAQQSTPRSNSSSVVSNNINNLDNYCVYVNSTALLQPGLTATTQNVG
KVSSLATHV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcgatattgcatctatttgctcatctcatctgtgtgtttgcttatccctgga
tccctgtctctcacgtctccacgctctgggtcgggggaacagtcctttatacgtgagcct
tcggatcaaatcgccattgtgggagagcatgtgacacttccgtgtcgtgtagtgaataaa
aaaggggagttacaatggacgcgtgatgggtttggacttggagttgagcgaaatttgacg
gggtttagtcgttatcacatgattgggagtgatgaagaagatgactggacccttgacatc
aatccagtggatctagaggacgatgcagagtttcaatgtcaagtgggagcagctgagaac
acgcctccaattcgatcccgggacgccgttttaactgtccttgtcccaccttccaaaccc
attattcatcccagtggggactttctaaggactgtggaagggaaaggtgtggagattgtc
tgcgagtctcggggtggaaagccagctgctgagattacttggtttgatagtcaaaatgaa
gtcgttcgtgaaggagttcaaacctttcaagaacttgcagaggatggaaaacgtttcaat
acgaagtccattctcaaatttgtagcaaaggcagagtctcatcatgaaaagaactttacg
tgtcaagctcaaaactctgcggatcggcagccgcattctgtttcaatcaaccttcaggtc
cattatccacccaaagtgaatcttcaacaaacagatccaatgattaaggagggtagcagt
gccaagttctcctgcaatgctcatgcaaatccttctcaaatgagctacaattggtatata
tctgggaagttagttccagaggcgaagaaaagggactatatcataaatagtgtggatcgt
agacttcacaacgccattattcgatgtgatgtgaccaatagtattgggaaaacggttcaa
gcagcaaagctcaacgtttcttatcctcccctttttctaacaagacctgagagttcttca
ggaagtcctggagagaatgttcaacttagttgtcgcgtggactcaaatcctaaagccctt
taccagtggtatcacaagtcatttttagtgggtcactctgagaacataacaattaaggtg
gatgaacgtcaaactggagaatatgtctgcaaggcttttgtacctggctatgaggatatc
actgcaagtgcaatgctctacatgaagcagtcccccattattcgcaacggaaatcgtttt
gagtctggagcagtaggggaaacagggtcttttagctgctcagggctctctgtccctcct
gcaaaatacgtgacttggttttttaatggtgcaaagattaatatccactcagagaagtat
acgattcaagataaactttcctctaatgaactagagtcaaccctcattattaaaaaaatt
gatgaaaaagactttgggtcatattcttgtactgtgagcaatgatcttggagaagatacg
gatattatgcatttgagaaagagaagtgcactaccacttttggtcattatggctgcagtc
attggaggagtgattttgacgattgcagttattatgattgtcgttctatgtcgtcgctcc
tcaacaagctccaataagaaactgaataatctcctcacgatccatagaaccgtgataaaa
ggaaatcataataacaattcatctacatctgcagatgaaatatccaacaactcatcggag
atgaataaagttgaagttcgaacttcttcatctctaagtcaagaagagtgttggggtgaa
cgctccgaagattcctacaagaatcctccactctcagtttcacctcctcttcagggagta
ggaggaggggacataaattcatataatactcaaacccaaagaatcattctgcagaagcca
acttcgattgatgttgtagactccatgaattacagagacacttatggctccggcattgct
catttgaatggtggatacacttctaataatgcttcatctagtcctttaatgaaatccaat
gataatattttttcttcgtcagcgcatccctcatcctattatgccaataccaaatacact
catcctacttccagtggaaataatggtgttgttggtagtagtggtagcggatatcatcat
ggtggaggacaacatggtggcttcgactacattattcctcctgctcaacagtcaacacct
cggagtaacagttcctctgtcgtctcaaacaatattaataatttagataattactgcgtc
tatgttaattccacggctttgcttcaacccgggcttacagcgacaacgcagaacgttgga
aaagtatcatctcttgcaactcatgtctaa
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