Lepeophtheirus salmonis (salmon louse): 121129113
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Entry
121129113 CDS
T08214
Name
(RefSeq) protein fem-1 homolog C
KO
K25805
protein fem-1 homolog A/C
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121129113
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
121129113
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Ank_KRIT1
TPR_NPHP3
TPR_12
TPR_10
Motif
Other DBs
NCBI-GeneID:
121129113
NCBI-ProteinID:
XP_040580726
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All DBs
Position
14:complement(36560631..36621625)
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AA seq
684 aa
AA seq
DB search
MDFRNVVFNAARDGKLRRLKVFLDHRPFEEVKQLVSAQTNGATPLVLSCRNGHQEVVEYL
VERCGANVEQPGSVTFDGETIEGAPPLWCAAAAGHAQIVKLLVQEGKANVNSTTKTNSTP
LRAACFDGHYEIVKYLVEHGANIEVANRHGHTCLMIACYKGHLRIAKYLIAIGADVNRKS
VKGNTALHDCAESGSLEIMKLLLDHGAIMDVDAYGMTPLLAASVTGHIHIVEYLISEPNL
VSRQERIDALELLGATFVDKKRDMVGSYKLWKRAMEERYIGNQLVVPKCVVASPISAYEN
TVEVETIEQLEEIISDPDEMRMQALLVRERILGPAHPDTSYYIRYRGAVYADMGLFERCI
TLWMYALDMQQKMLEPLSPMTQSSLLSFAELFSFMMKETRNNANAANNNNQLRNGGHHSR
AIAAAGINFINNNNNNNIRGSPPTSNEESSSSSSTSSPSENSPPFNFCDIMTVFNKAVKQ
VEMGLESMDLVNLERDITYFNRAIIIILHLVCLFTKLLSHLKESQIFDVKKAVYNFLKLG
ARGRNGATPLHLACTKDSTSVGRYPICTFPSLEAIQLLIECGADPNARDKDDNTTLHTAA
SAQNKVPKGNVIELLLRSGAHPDTVNKDGKVYSDLIYGPIYKVVSKPVKYVTLQCLAAKA
VKKYNLHTDRSIISPDLQAFLDIH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggattttagaaacgttgtttttaatgctgctagagacggaaaactacgtcgactcaag
gtatttttagatcatagaccatttgaagaagtgaaacaactcgtatcagctcaaacaaat
ggggccacaccccttgttttatcttgtcgaaatggtcatcaagaagttgttgagtacctc
gttgagcgttgtggagcaaatgtggagcagcctggatctgtgacattcgatggcgaaacg
attgaaggggctccaccgctctggtgtgcggctgcagctggtcatgctcaaattgtcaaa
ctccttgtgcaagaaggaaaagccaacgtcaactcaactactaaaacaaattctacacct
ttgcgagcagcttgttttgatgggcattatgaaattgttaaatatctcgttgaacatggt
gctaatattgaggtagctaatcgccatggacacacgtgtcttatgattgcttgttataaa
gggcatctaagaatagctaagtacctcattgcaataggagcagatgttaatcgcaagtct
gtcaaagggaatacagcacttcatgactgcgcggagtctggttcattagaaattatgaaa
ttactattagatcatggggccattatggacgtagatgcctatggcatgacaccattatta
gctgctagcgttactggacatattcacattgtggagtatcttatatcagaacctaattta
gtttctcgacaagaaagaattgacgcacttgagctccttggagctacgtttgtagataaa
aaacgagatatggttggatcctataaactttggaaaagagccatggaagaaaggtatata
ggaaatcaattagtcgtacccaaatgtgttgttgcttcacctatttccgcgtatgaaaat
actgtagaagttgaaacgatagaacaactagaggaaatcatatcagatcctgatgaaatg
cgcatgcaagcattactcgtccgtgaaagaatccttgggcctgctcacccagatacatcg
tattatatccgctacagaggagcagtatatgcagatatggggttatttgaacggtgtata
actctatggatgtacgcattggacatgcaacaaaaaatgttggagcccctgagcccaatg
actcagagttccttactcagctttgctgagctctttagtttcatgatgaaggaaactcgt
aataatgccaatgccgccaacaacaataaccaacttcgcaatggtgggcaccatagcaga
gctatagcagcagctgggatcaacttcattaataataataacaacaacaatatccgaggc
tcaccacccacatccaacgaagagtcctcctcctcctcatctacatccagtccttccgaa
aactctcctccttttaatttttgtgatatcatgactgtttttaataaagctgtgaaacaa
gtggaaatgggactcgaatccatggatcttgtcaatctagaaagagacatcacatatttt
aatcgagccatcattattattctgcatcttgtttgtctctttacaaaactactcagtcat
ctcaaggaatcacagatatttgatgtaaaaaaggcagtctacaactttttaaaactcgga
gcaaggggacgtaatggagccactcctctccatctagcgtgtacaaaagattccacgagt
gtggggcgctatccaatctgtactttcccgtccttagaagccattcaacttctaattgag
tgcggagcggatcctaatgctagagataaggatgataacaccactcttcataccgctgct
tctgcccaaaataaagtacccaaaggaaatgtcattgaacttttactccgttcaggagcg
catccagacacagtgaacaaagatggaaaagtgtactcggatcttatttatggacccatt
tataaagtcgtttctaaacctgtaaaatacgtcacccttcaatgccttgctgctaaagct
gttaagaaatataatctccacacagatcgaagtataatctctccggatctgcaggccttc
ctggacattcattaa
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