Lepeophtheirus salmonis (salmon louse): 121129148
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Entry
121129148 CDS
T08214
Symbol
trh
Name
(RefSeq) uncharacterized protein trh isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121129148 (trh)
Transcription factors [BR:
lsm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121129148 (trh)
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
121129148
NCBI-ProteinID:
XP_040580760
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All DBs
Position
14:25743744..25772763
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AA seq
898 aa
AA seq
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MQGSTGEAAHYGHSTPVPMDLHMPQPFSYYSCIMDNNAMFAAQQAQYNKMYCGLDNATGR
RGITDELTSQGTINTRILELRKEKSRDAARSRRGKENFEFYELAKMLPLPGAITSQLDKA
SIIRLTIAYLRLREFAASGNPTWVKDPQIKKEFNSTVEHSTSMRNRANVSGIALDIFEEH
EGTHILQSLDGFAISLNSDGRFLYISETVSIYLGLSQVELTGSSVFDYIHQSDHAELAEQ
IGVTLAHQNSRISSPGGGSDDSSSGTSPGIGAPPAIPDGKPFCYPVTSLMHSRPERMSGK
PSYDRAFCVRMKSTLTKRGCHFKSSGYRVVLLLGKLRAQYSYSQKKNLPPIMGFIGLAIA
LPPPSVHEVRLESDMFVTKLTFDFKIAHCEPKVSDLLDYTGEELTGQSMYSIIHAEDVHR
IKSMHEDLLNKGQVMSNYYRLMNKMAGYTWMQSCATLVCNTKNAEEQSIICVNYVLSGPQ
ESNIIMDEKQMSRGPGIRIKEDCDPCDYGPANSPRDKVFDTSLSGDHKLRDKCEMNGTVR
GGGGHVVRHPTTGNEMPQDPHNMYIGPEHDPGQVRLGQQPAHASFDNKKNNSTFLATTNT
DLISSDNAVKRCWRKRASSKDDGDKQHKSKKPNPSDKKISRDSNKDHVIINEEGSDLELK
DERSEEADGAPSSLRSEILPPLQKAPPTLSSLPLDSDLKNNNHPVDIIKISKSSKENEND
SPSSLNTPNNLNNNNNINNPALHSDFNDFLLYKQRKGPSFPSPWIPGSGGGSPILKSLYG
GDSNASNLGAGPPGGVGAGSEVKSDSFSSIVASYQQAGVYNSSNGPPPPNPQQPAQPLAI
KPPQLYGLDQYHGYTDQLLYPHPGTTGFHLYHPSPRGAPTWYSPSGLPGGANSSSPST
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggatcaaccggagaggcagcacactacggacattctactcctgtccccatggat
ttgcatatgccacagcctttttcatactatagttgtataatggacaacaacgccatgttt
gctgcacagcaggcccaatataacaaaatgtattgcggattggacaatgcaacaggaaga
cgtggaataacggatgaattaacctcacaaggcaccattaatacaaggatattagagctt
cggaaagagaaatcccgagatgcggctcgatcacgtcgcggcaaagaaaactttgagttc
tacgaattagcaaaaatgctcccgcttccgggtgccattacttcccaattggacaaggct
tctattatacgtttaacgattgcttatctgagactaagagagtttgcagcgagtgggaat
ccaacctgggttaaggatccacaaattaaaaaagaatttaattccacagtggaacattcc
acttcaatgaggaatcgagccaatgtgagcgggattgctctggatatcttcgaggagcat
gagggaacgcatatccttcagtctctagatggctttgcaatttcactcaattcagatgga
cggttcttatacatttctgaaacagtctccatttatttgggtttatcacaggttgaatta
actggaagtagtgtttttgattacattcatcaatcggatcatgcagaattggcagagcaa
atcggagtcacccttgcacatcaaaactctagaatttcttctccaggaggggggagcgat
gatagcagcagcggtacatccccgggtatcggagctcctccggctatccctgacggtaag
cctttttgttaccccgtcacctccctcatgcactctcgaccggaacggatgtctgggaaa
ccctcatatgatagagctttctgtgtacgaatgaagtcaacgctcacaaagagaggctgt
catttcaagtcatctggatatcgagttgtactactcctaggaaaactccgagcacaatat
tcttactctcaaaagaaaaaccttcccccaatcatgggattcattgggcttgctattgcc
ttaccgcctccaagtgttcatgaagtcagattagagagtgatatgtttgtcacaaagctc
acctttgattttaaaattgcacattgcgagccaaaagtgtcagatctcttggactatact
ggagaagagctcacaggacaatccatgtactccatcattcatgctgaagacgtgcatcga
ataaaaagcatgcatgaagacttgctcaacaaagggcaagttatgagcaactattatcgg
cttatgaacaaaatggctggatacacttggatgcagtcatgtgcaaccctggtttgcaat
acaaaaaatgcagaggagcaaagtataatctgtgtcaattatgtcttgagtgggccacaa
gagtcaaacatcatcatggatgaaaaacaaatgagtcgaggcccagggattagaatcaaa
gaggattgcgatccttgtgattatggcccagcaaattcaccaagggataaagtttttgat
acatccttgagtggggatcataagttacgagataaatgtgagatgaacggaactgtaaga
ggaggtggaggacatgtcgttcgacatcccacgactgggaatgagatgccacaggatccg
cataatatgtatattggcccagaacacgacccgggccaggtgaggttaggacaacagcca
gcccacgcctcatttgacaataaaaaaaataactcgacctttttggcgaccaccaacact
gatctaatatcatctgataacgccgtcaaacgctgttggcggaaaagggcgtcgtctaag
gatgacggcgacaaacaacataaatctaaaaaaccaaatccttctgataagaagatatca
agagatagtaataaagaccatgtcatcatcaatgaggaaggctctgacctcgaattgaag
gatgagcgatcagaggaagcggatggagcaccctcaagtctacgaagtgaaatcctccca
cctttacaaaaggctccccctactctttcttcactgcccttggattcggatctaaaaaac
aacaaccatccagtggatatcattaaaatatccaagtcgtccaaagagaacgaaaatgat
tccccctcctctcttaacacccccaacaatctcaacaacaataacaatatcaacaaccca
gcccttcattcagacttcaatgactttctcctttataagcaacgcaagggaccctccttt
ccaagtccttggatccctggctcaggtggaggaagtcccattttaaaatccctttacgga
ggtgatagcaacgctagtaatcttggggctggtcctcctggaggagtaggagctggatct
gaagtaaaatcagattcattctccagcattgttgcttcataccaacaggctggggtctat
aacagtagtaatggacctcctccaccaaatccacaacagcccgctcaacctctagctatt
aaacctccccagctctatggcttagaccaatatcatggctacactgatcagctcctctat
ccacatccaggcacaaccggttttcatttgtatcatccctctcctcgtggtgcccctact
tggtattctccatctgggctgccgggtggagctaattcctcttcaccctcaacttga
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