Lepeophtheirus salmonis (salmon louse): 121129204
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Entry
121129204 CDS
T08214
Name
(RefSeq) nuclear hormone receptor HR96-like isoform X1
KO
K14035
nuclear receptor subfamily 1 group I
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121129204
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lsm03310
]
121129204
Transcription factors [BR:
lsm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121129204
Nuclear receptors [BR:
lsm03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
121129204
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
zf-RRPl_C4
Phage_int_SAM_3
DUF3394
Motif
Other DBs
NCBI-GeneID:
121129204
NCBI-ProteinID:
XP_040580834
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Position
14:28580219..28642780
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AA seq
414 aa
AA seq
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MTFKQCRVCGDKALSFNFNAISCESCKAFFRRHATKNKVLKCPFLNNCEINTITRRFCQK
CRLKKCFEIGMEKSFIQSEEQKLEKRRKIQLNRDKSNASSSSLTSADQLNQSLSEESSST
STVCESAINDSCIQIALQTEFHPTSLENNPKTETNSTNEFNSKEMSRIQELFVASMFLEE
PLDPKTSNPSNLISLINLTDLAVKRIIKMTRGIVAFNSLCQEDRIALLKGGCSELMMLRS
IKNFDADKNSWRLPTGCDGSKELTCDMKVLKEASLLGLKLYKEYQKFVLSFNPKWRWNET
IILLLSAIIIFSPQRANIVHKNVIKLEQETYYYLLKRYLENFYKGRRCEARSAFLSLIER
LQDLHRLSETHLQVYLEVDQNYMEPLLIEIFDLNPKIKNNSKIFTDLTSSSNSN
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgactttcaaacaatgtcgtgtctgtggagacaaagcattgagttttaattttaatgcg
attagttgtgagagttgcaaagcattttttcgaagacatgccactaagaacaaggtattg
aaatgtccatttttgaacaattgtgaaataaataccatcactcgacgattttgccaaaaa
tgtcgtctaaaaaaatgttttgaaataggtatggaaaaaagttttattcaatcggaagaa
caaaaactagagaaaagacgaaaaattcaactcaatcgtgataaatcaaatgcatccagt
agttcactcacaagtgctgatcaattgaatcagagcttatctgaagaaagttcatcaact
tcaaccgtctgtgaaagtgcaataaatgattcttgtatccagattgccctgcaaaccgaa
tttcatcctacctctctcgaaaacaatcctaaaacagaaacaaacagtacaaatgaattt
aattccaaagaaatgagtcggatacaagaactttttgtggcttcaatgttcttggaggaa
ccccttgatcctaaaacttcgaatccaagtaatcttatcagtctgataaatctgacagat
ttggctgttaaacgtattatcaagatgactcgtggaatcgtggcatttaacagcctttgt
caagaagatcgaattgctttgctaaaaggaggatgctctgagctgatgatgcttagatcc
attaaaaactttgatgcagataaaaattcatggagactacccactggatgtgacggatcc
aaggaattgacttgcgatatgaaagtgcttaaagaagcctcattattaggactgaagctc
tataaagaatatcagaaatttgtattgtcatttaatcccaaatggagatggaacgaaact
ataatattactcctttctgcgattattattttttcaccacaaagagctaacattgtgcat
aaaaacgtgatcaaattagagcaggaaacgtattactatctactcaaacgctatttggaa
aacttttacaaaggaaggagatgtgaggctcgatccgccttcctttctctcattgaacgt
cttcaggacttgcatcgattgagtgaaactcaccttcaagtctatttagaagtggatcaa
aattatatggagccactgttgatcgaaatctttgacttgaatccaaagataaaaaataac
tccaaaatttttactgacttaacctcctcttctaatagtaactag
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