Lepeophtheirus salmonis (salmon louse): 121129241
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Entry
121129241 CDS
T08214
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04136
Autophagy - other
lsm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121129241
04136 Autophagy - other
121129241
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsm01002
]
121129241
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121129241
03029 Mitochondrial biogenesis [BR:
lsm03029
]
121129241
Peptidases and inhibitors [BR:
lsm01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
121129241
Membrane trafficking [BR:
lsm04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
121129241
Mitochondrial biogenesis [BR:
lsm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121129241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Nepo_coat_C
Motif
Other DBs
NCBI-GeneID:
121129241
NCBI-ProteinID:
XP_040580883
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All DBs
Position
14:38379592..38384306
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AA seq
382 aa
AA seq
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MEFYYEASSLYYGSDCTDSVDSQWPNTDCPVWILGNELSAKLDITELNEEIRSRLLFTYR
KDFSEIDESGYTSDSGWGCMLRCGQMVLGEALQRVVLGRDWKWSRNNHTVDKDTTVKYIN
IVHLFQDSKVAPYSIHQIALMGESIQSKKPVGTWFGPNTVAQVLRKLSIFENSIPINIHI
AMDNTIIVDEIKESCSYFGEDSAGKPLILFIPLRLGLTEINPIYFQDLKECFEFPQVLGV
IGGRPNHALYFIGYVDNELIYLDPHVSTQVANKVSNFGDEEDQTYHTERAYRMDFKDLDP
SLSLCFLCKNESEFDDLCQRFLFKLIRGHNSPLFEICRQRPEHLEACSPNQDLPNLIPDE
NTGKEYEEIRHCDTSDEDFEIL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggagttttattacgaagcgtcttcattgtattatggatctgattgcacagacagtgtg
gactctcaatggccaaacacagattgccccgtttggattctcggaaatgagctgagtgct
aaactcgacattacggaactcaacgaagaaattcgctcgcgtcttcttttcacgtataga
aaggatttttcagagattgacgaatctggttacacatcagattcaggatggggctgcatg
cttaggtgtggacaaatggttcttggagaagcattacaaagagtggttttgggacgagac
tggaaatggtcacgtaataaccatacagttgataaagatacaactgtcaaatacattaac
atcgttcatctctttcaagattctaaagtggctccatattcaattcatcaaattgctctc
atgggagaatccattcagtctaagaaaccagtgggcacttggtttggacccaatacggta
gctcaagtattaagaaaactgtccattttcgaaaattcgatacctattaacattcacata
gccatggataataccataattgttgatgaaataaaggaatcttgtagttattttggtgaa
gattctgcagggaaacccttgattctcttcatacctcttcgtttgggccttacagagatt
aacccaatttactttcaggatttaaaagaatgttttgaatttcctcaagttttgggcgtg
attggaggccgtccgaaccacgctttatattttataggatatgttgataatgaactaata
tatttggatcctcatgtgtccactcaagtcgctaataaagtaagtaattttggagatgaa
gaagatcaaacctaccacaccgaaagagcttataggatggactttaaagacttggatcct
tctttgtctttgtgctttttgtgcaaaaatgagtcggaatttgatgatttgtgccaaaga
ttcctttttaaactgattcgcgggcataattctcccctctttgaaatttgtcgacaaaga
ccggagcacctggaggcttgttcaccgaatcaggatttacctaatctgattccagatgaa
aatacggggaaggaatatgaagaaataagacactgcgacacttcagatgaagactttgaa
attttataa
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