Lepeophtheirus salmonis (salmon louse): 121129433
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Entry
121129433 CDS
T08214
Name
(RefSeq) uncharacterized protein isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121129433
Transcription factors [BR:
lsm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121129433
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121129433
NCBI-ProteinID:
XP_040581089
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Position
14:complement(33852796..33855331)
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AA seq
482 aa
AA seq
DB search
MLPGEGEIKSSSALMDSYSKYASNFGGANAFHHGYHHGYGYPHPPSSPGDYSKSLGTHLP
QPSPTLSTGSGGMDELSPTPPHNNNIKSLGGIKPDDKNNPDRVKRPMNAFMVWSRGQRRK
MAQENPKMHNSEISKRLGTEWKTLSETEKRPFIDEAKRLRALHMKEHPDYKYRFFRSRPR
RKTKTLMKKDKYPMSGGNGGGGGPGSGPGGGGLPCPGGGNPLGGPGSQGGGPGASAPSSN
TPGGTGVSSGPYSSSAAAAAMNSYNGYHYDPNVYGSYSSAASSPYARYDMMYGGSSYMNG
SYAAMYAAANHAAAAPPSGSPYGSSSISPSGRVSPGSVKSESASDSPNYAHVKREHTPPS
SSNPSGPLPNTTNPQDLNRMISMYLPGGGGGGGGPPGNHPGSEEARLHSMYAAGHYSAAA
AAAVGMTAGHPPPPPLHHAIPPSASSSSPHHQIVVHGDSGPNSSSSGSSNSNNASQQQIT
HM
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccggagaaggagagatcaagtcttcttccgctctcatggattcctacagtaaa
tacgctagcaactttggtggcgcgaatgcctttcaccacggctatcaccatggctatggc
tacccacatccaccttccagcccaggagattatagcaagtccctgggaacgcatcttcca
cagccttcccccacgctgagcacaggctcaggtggtatggatgaactgagtcccactcca
cctcataacaataatatcaagtccctcggagggatcaagccagacgacaaaaacaatcca
gatcgggtcaaaagacccatgaatgcctttatggtatggtcacgtggacagcgaaggaaa
atggcgcaggagaatcccaaaatgcacaactctgagatttccaaacgccttgggactgag
tggaaaactctctcggaaacggagaagcggcccttcatcgatgaagccaaacgacttcga
gcactccacatgaaagagcatcccgattacaagtacaggttttttcgttccagacctcgt
cggaaaaccaaaacccttatgaaaaaggacaagtatcccatgtcaggcggaaacggaggt
ggcggcggtccaggctctggccccggaggtggaggccttccctgccctggaggagggaat
ccattaggagggccagggagtcaaggcggcggcccaggagcatcagcaccttcatcaaat
acccctggaggaactggggtgtcatcaggaccctactcctcctctgctgccgctgctgct
atgaacagctataatggctatcattacgatcccaacgtctatggatcttatagttccgct
gcaagttctccctatgcccgctatgacatgatgtatggaggctcatcttatatgaatggt
tcatatgcagccatgtatgccgctgccaatcatgcagctgccgcaccaccctcagggtca
ccttacggtagttcaagcatcagtccatcaggacgtgtcagtcctggctctgtgaaatcc
gagtcagcttcagactctccaaattacgctcacgtcaaacgtgagcacacaccgccctcc
tcttcaaatccttccggaccccttccaaatacgacgaatcctcaggacctgaaccgaatg
atttcaatgtatctcccaggaggaggaggaggtggtggtggaccacctggcaatcatccg
ggaagtgaggaagcccgcctacatagcatgtatgcggctggacattactctgctgctgct
gctgcggctgtgggtatgaccgctgggcatcccccaccaccccctctgcatcacgcaata
cctccatcggcgagctcttcatctccacatcaccaaattgtcgttcatggagattcaggc
cccaactccagctcttccggatcctccaacagtaacaacgcctctcaacagcagataaca
cacatgtaa
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