Lepeophtheirus salmonis (salmon louse): 121129511
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Entry
121129511 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: condensin complex subunit 1-like
KO
K06677
condensin complex subunit 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121129511
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
121129511
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
Cnd1_N
Cnd3
MscS_porin
Motif
Other DBs
NCBI-GeneID:
121129511
NCBI-ProteinID:
XP_040581167
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Position
14:4447454..4451402
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AA seq
1229 aa
AA seq
DB search
MKEIEFDIRNDGSCFGHKDWLDSFYSVISRFHEELPTNIKAIAHDCLLNAGDQLLQRVDS
ILNEQDPDPEAKLECLNDMKMIFYLITQLTELIERETVEKSSQISAASLPGRGRKKNSTS
GYDWAGMNWESSRMSAINFMYKILQLNVNRLFTPPVAEEDFINCFANAGFRILENPVMAH
QRNRSVRMSVIQVLSSLNSRFDYSLSCSFKLVQELKLFEHMVSPLAEAVEVFVKEFNCKS
IVMEIIQEISRLDMKELNRDTSATRSYSLFLFELTEKLPEYVRPSLSLXIVHLDGDSYMM
RKSILGILGEIVIKVLSKEDLDEKSKDNRNQFLEYLEDHIHDINAHVRSSVLSIWSKLCV
AMSIPLGRQYSVLKLTMGRLLDKSSIVRKQAVQLLTSLLQCNPYTFSLPIEELESQLNAE
SKKLQDLEGLIDKEQKKWDDEDIELHLKEILESDDYDKENLPKEVVWDGAVHGEVSRRIK
HLITRKTYINAIALLMDARIKFPDEFSAESETISSLKDIYFSASMYDQPDEEALTKQRIL
VAYLKDSVSFGKLMNDSLPIMCQLLGSKQSTDILEAIDFFVTAFEFGILNAMMGVRKMLS
LIWSNESVVKEAVVKAYRRLYIDVGTRSGGASQIVKNIIALVRGSTLGECTSLEALVGML
VETKDIGKECFQILWQIFTLVMPDSNEESSCDAIMILGMIGLKEPSVVSSNVSIIIEHAF
GERGLNNFQLVCEACKSLLKIVPRHKSDDLETPFRYDSDDKLFESLHKIIVEGITRCESQ
NYIPMVKVAVTVIYEFSEHPDRRMAQIALDLICAVCDDNNINMTEIKRLVYVAGQIAVCQ
LKHLDISIFCEMKRRNHLREMXKEKKRKRKSVANIPNSASETPRNGNNDDDELVGAEGDD
AEAEFIRNICENETVTGGNLLSHFVPFIVSLCSSQEHDDSLKTVAALTLSKFMLVSNEFC
DQHLRLFFTLLEKSKNETTRANMIIAAGDLSVRFPNTLEPWTPRMYARLRDESSLVRSNT
LTVLTHLILNDMIKVKGQISDMALCIIDKVDRISCMAKLFFTELARKGNSLYNVMPDIVS
RLSSPEVGVPEEEFREIMKFIICLIEKDKHLESLVEKMCHRFRVTKTDRQWRDLSYCLCS
FSFNDKVVKKLSDNFNCYIDKLYIQDVYDSLTSILVLAKKTVKNETTIIIEEFEGKIEET
HERGLEDHIANERANRAKAGKPNEELDEE
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaattgagtttgatattcgtaacgatggatcttgctttggacataaggattgg
cttgactcattctattccgtcatttcccgatttcacgaggagctgcccacgaatatcaaa
gcaatagcccatgattgtcttctcaacgcaggagatcaactgcttcaacgggtggactcc
atcctcaatgaacaagatccagatccggaagcgaaattagaatgcctcaatgatatgaaa
atgattttttatcttataacccaactcacggaactcattgaacgggaaactgttgaaaaa
tcatctcagatatccgctgcatcccttccgggaaggggaagaaagaaaaactctacgagc
ggatatgactgggcaggaatgaattgggagtcttcccgaatgagtgctattaactttatg
tataaaattctacaactcaatgtcaatagactctttactccacctgtagcagaggaggac
tttattaattgctttgctaatgcgggtttcagaattttggaaaatcctgtaatggcccat
cagcgaaatcgaagtgtgcgtatgtccgtgattcaagtattaagttcattaaactcgcgc
ttcgattactccttatcatgtagttttaaactagttcaagaattgaaactttttgaacat
atggtctctcctctcgcagaggcggttgaagtctttgtcaaagagttcaattgcaagtct
atcgtcatggaaatcattcaagaaatttcgaggttagatatgaaggagctaaatagagat
acttctgctacgagatcctattcacttttcttatttgaactcactgaaaaactccccgag
tatgtaagaccttcattaagtctataaatcgttcatttggacggggattcttacatgatg
cgtaaaagtatattgggcatacttggagagattgtaattaaagttctatctaaagaagat
ctcgatgaaaaaagtaaagacaatcgcaatcaattcttagaatatttggaagatcatatt
catgacattaacgcccacgtaagatcgtcagtactttcaatatggagtaaattatgtgtg
gctatgtcgataccattgggtcgtcaatatagtgtactaaagttaactatgggtcggcta
ctcgacaaatcttcgattgttcgtaaacaagccgttcaacttcttacttccttgcttcag
tgtaatccttatacgttttcccttcctattgaagaacttgagtctcaactaaatgccgaa
tctaagaaattgcaagatttggaaggattgatagacaaagaacaaaaaaaatgggatgat
gaagatattgagttgcatttgaaagaaatattagaaagtgatgattatgacaaagaaaat
cttcctaaagaagttgtttgggatggagcggttcatggtgaagtttcgagaagaattaag
caccttataacacgtaaaacttatatcaatgcaattgctctcttaatggatgctaggatc
aagtttcccgatgaattttcggctgaatcggaaacaatatccagccttaaagatatatat
ttttctgcatctatgtatgatcaacccgatgaagaagctttgactaaacaaagaattctt
gttgcttatctcaaagattcggtctcttttggaaaacttatgaatgactcacttcctatt
atgtgccaacttttaggatcaaagcaatccactgatattctcgaagctattgatttcttc
gttacagcatttgaatttggtattttaaatgctatgatgggcgttagaaaaatgttgtct
cttatctggtcgaatgaatcagttgtgaaggaggctgttgtcaaggcatacaggcgtctc
tatattgatgttggcactagatctggaggagcttctcaaatagtcaagaatattattgct
cttgtaaggggatccactttgggcgaatgtacatcacttgaagctctagtgggtatgtta
gttgagacgaaagatataggaaaggagtgttttcagattctttggcaaatatttacactc
gttatgccagattctaatgaggaatcatcatgtgatgctataatgatacttggaatgatt
ggtctcaaagagccctctgttgtgtctagtaatgttagtatcattattgagcatgctttt
ggagaacgaggcctaaataattttcaactggtttgtgaagcatgtaaatctcttttaaaa
attgttccccgacataaatcggatgatcttgaaactccatttagatacgattctgatgat
aaacttttcgaatctctacataaaatcattgtcgagggtataacccgttgtgagagtcag
aattatattcccatggtgaaagtcgctgtaactgttatctacgagttttctgaacatcca
gatcggcgtatggcacaaatagcattagacttaatttgtgcagtctgcgacgataataac
attaatatgacggaaataaagagattagtatatgttgcaggacaaattgccgtgtgccaa
ctcaagcatttagatatctccattttttgtgaaatgaagaggcgaaaccatttgagagag
atgnnaaaagaaaagaaacggaaacgcaagtccgttgctaatattcctaacagtgcaagt
gaaactccaagaaatggtaataatgatgatgatgaacttgttggagccgaaggagatgat
gcagaagcggagttcatcagaaatatttgtgaaaatgaaactgtcactggagggaatctg
ctatcacactttgttccatttatcgtaagtctctgctcttctcaagagcatgacgattct
ctaaaaacggtagcagctttaactttatccaaattcatgctagtttcaaatgaattttgt
gatcaacatcttcgtcttttttttactcttttggagaaaagtaagaatgaaactactcgt
gcgaatatgataatagcagcaggagatctttccgttcggtttcctaatacgttagaacct
tggactcccaggatgtatgctagattacgagatgaatcctctcttgtcaggagtaacaca
ttaactgttcttactcatctcattttaaatgatatgataaaagtaaaggggcaaatatca
gatatggctctatgtattattgacaaggtggatcgaatttcttgcatggctaagttattt
tttactgaattggctagaaaaggaaattctctatataatgttatgcctgatatcgtctca
cgactctccagccctgaagttggagttcccgaagaagaatttagggaaataatgaaattt
attatatgtctaattgagaaggataaacatttagagtctcttgttgaaaaaatgtgtcac
cggttcagagtcactaaaacagatagacaatggagagatttgtcatactgcctctgttcc
ttcagttttaatgataaagtagttaaaaagctcagtgataatttcaattgttatattgat
aaactttacattcaagacgtctatgattctctaacttccattctagtgcttgccaaaaag
actgttaaaaacgaaactacaattattatcgaagagttcgaaggaaaaattgaagagacc
catgagagaggattagaagaccacattgcaaatgaaagagctaatagggcaaaagctggt
aaacccaatgaagaactagacgaagaataa
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integrated database retrieval system
