Lepeophtheirus salmonis (salmon louse): 121129523
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Entry
121129523 CDS
T08214
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121129523
Enzymes [BR:
lsm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121129523
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121129523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
zf-C3HC4_4
zf-ANAPC11
zf-rbx1
TerY_C
Prok-RING_4
Orf78
TRAF3_RING
Bac_rhodopsin
zf-RING_11
Adaptin_N
FYVE
Motif
Other DBs
NCBI-GeneID:
121129523
NCBI-ProteinID:
XP_071749670
LinkDB
All DBs
Position
14:complement(2867362..2870021)
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AA seq
244 aa
AA seq
DB search
MYGVGDECIMLFNVIGFFFIVYLLYVIYKYVARNASSNSSSPTSSPSSLMSNLNNRVRSE
SPECSICLESVRFAVETNCGHVFCGACLVEYVDRLATLSTPTCPYCRQRITMILLYFTPE
ESQDSLQDADRNLRNCLIEKIKSYNRSYSDEPRSILEQIRDFPILARRLWNMFWDYPDRT
TLFFRIRVLIPNVITILYFLSPFDIIPEFLFGIFGLFDDIFIILCGGFYAVNLYRSLVAQ
RGLV
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtatggagtgggtgacgaatgcatcatgctttttaatgttatcggattcttttttata
gtatatctcttatatgtaatatacaaatacgttgctcgaaatgcatcatccaatagttcc
tctccaacatcatccccatcgtctctcatgtcaaacttgaataatcgagtccgctctgag
agcccagaatgtagtatttgcttggagagtgttcgttttgcggtagagacgaattgtggt
catgttttctgcggtgcttgtcttgttgaatatgtggatcgtttagctactttgtcaacc
cctacatgtccatactgtcggcagagaattacgatgattctcctctactttactcctgaa
gagagtcaagactctcttcaagacgcagatcgcaatttaaggaattgtctaattgaaaaa
ataaagagctataatcgatcatattcagatgaaccacgctccatactggagcaaatccgc
gatttccccattcttgctcgaagattatggaatatgttttgggattaccccgatagaact
actttgttttttaggatccgagtccttattccaaatgtgataacaatactttacttcctg
agtccatttgatatcattccagaatttttgtttggaatttttggactctttgatgatatt
ttcattattttatgcggtggattctatgctgttaatctatatagaagcctggtggctcaa
cgtggcttagtgtga
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integrated database retrieval system
