Lepeophtheirus salmonis (salmon louse): 121129843
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Entry
121129843 CDS
T08214
Name
(RefSeq) short transient receptor potential channel 4-associated protein-like
KO
K11796
Trpc4-associated protein
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsm01009
]
121129843
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121129843
Protein phosphatases and associated proteins [BR:
lsm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121129843
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
121129843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3689
Motif
Other DBs
NCBI-GeneID:
121129843
NCBI-ProteinID:
XP_040581494
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Position
14:36123675..36127635
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AA seq
743 aa
AA seq
DB search
MSSRWIHRKFYRSKNLLTSINESQRVGGGGSSSISLIDVSLLSDSENQLRKIRDASNENS
ALIKLLPILRALETAKEYQALILPHLRRLNEMLSESVDEEVKTLSLEFVEWNGLLILLSL
VFSGHPETVLLSFKILNKLCVFVDEASAIMSESREILTFAFQSFTSDLLFDEARKLVESI
LLNTPPLNLCSIPHFQKILSQLEGKKLASFCKILAVTVSDLDIYKDHKNHSLFSENCRNN
PSVPLPVKDINQELTLSVPGFLQKLVDQATKLPYLPRFSSLPTEIDHWVRLIDDVISDEL
ARPNLSLEPFSALIGGDLMDRVEALYVLSLFLIGRHRKRVQKELSELKLVPKLSDLFDQF
IWRYNAGRQRARLPGHTSRCECSPEVAVKMQFLRLIYGFCDHNEYKHLLLSPYEWEELKR
IKPTDSSVQDWDLAKSPISPSLMCSGTSGLLTKIVEVLKKEHTNSTYRFWLCRAVESYIR
GQISYADQVFLLRRGLLQHITASLINTDRRQKEIIQSSFDLLGELIKFNFDACRQMDAIL
STGAKLKRAMSLINERLVDSNMFIRGMVLASDHFLHSSDPEAVNFVNNSRLLSLFRDLDK
HIGYVIKLIRKIKVNNLTQENVSCLNTSLIIIMLSHRKHELPHFLEELSFRVQREALSHG
SNPPFMLHFRKLLTFWQEHYFQKAKDCTQLEQSSRIPFEFWKNTVDSLISSDANSNISLL
HYHNTWFVEKSANVSFTSFMEVE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagccgatggatccaccgcaagttctatcgaagcaagaatttgttaacctccatc
aacgaatctcagcgagttggtggaggtggctcctcttccatatccttgatagatgtctca
cttctctcagactctgagaatcaattaaggaagatccgggatgcatcgaatgagaacagt
gctctgataaagctccttccgatccttcgcgccctcgaaacagccaaggagtaccaagcc
ttgatcctgccgcatttacggagattgaatgagatgttatccgagtccgtggatgaggaa
gtcaaaaccctaagcctggaattcgtggaatggaacggacttctcatcctcttgtccctt
gttttcagcggccatccagaaactgttcttctctcattcaaaattttaaataaactctgt
gtttttgtggacgaggcttctgcaataatgagtgaatcacgagagattcttacttttgcc
tttcagtcttttactagtgatcttctctttgatgaagcacgtaaactcgttgaatccatc
ttattgaatactccacccctcaatctttgctccattccacactttcaaaaaattctctct
caattagaaggaaaaaaattggcgagtttctgcaaaatactcgctgtaacagtttcagat
ttggacatttataaggatcacaagaatcactctcttttttcggaaaattgtcggaacaat
cccagcgttccattacctgtcaaggacatcaatcaagaacttactctaagtgtaccagga
tttctccagaaattggtagatcaagccacaaaactaccttatcttccacgtttctcttcc
cttcccacagaaatcgatcattgggtccgtctaatagacgatgtgatatctgacgaattg
gcaaggcctaatttgtctctagaaccctttagtgcattgataggtggtgatttgatggac
cgagttgaggctctctatgttctgagcttattcttaatcggaagacatcgaaaaagagta
caaaaagaactctcggagttaaagctcgtgcctaagctgtcagatctatttgatcagttt
atttggagatataatgccgggcgccaaagagcccgtcttcctggtcatacttctcgatgt
gaatgttcacctgaagttgccgtaaaaatgcaatttcttaggttaatttatggtttttgt
gatcacaatgaatacaagcatcttttgctcagtccttatgagtgggaagaattgaagagg
attaaaccaacagattcttctgtacaagattgggatttggccaaatctcccatttctccc
agcttaatgtgcagcggaacatctggtctcttgacaaaaattgttgaagttctcaagaaa
gaacacacaaactccacctatcgtttttggctctgccgtgccgtagaatcctacatcaga
ggtcaaatatcctatgcagatcaagtatttttactcagaagaggtcttctccagcatata
actgcatccctcatcaacactgatcgtcgtcaaaaggaaataattcaaagtagttttgat
ctacttggtgaattaatcaaatttaacttcgacgcttgtcgacaaatggatgcaatattg
tcaacaggagcaaagctgaaaagagccatgtctttaattaatgaaagacttgtagatagt
aacatgtttattagaggtatggttttggcatcggatcatttccttcattcatctgatccc
gaagctgtgaactttgtgaacaattctcgacttctctctctatttagagaccttgacaag
catattggttatgtgatcaaactgatacgaaaaataaaagtgaataatcttactcaggaa
aatgtttcctgccttaatactagtctgataattataatgctaagtcatcgcaaacatgaa
ttacctcattttcttgaagagttatccttcagagtacaaagggaagccctatcgcatggc
tctaatccaccgttcatgctgcattttagaaaactcctcacattttggcaagagcattat
tttcaaaaagccaaggattgtacacagctagagcagagctcccgaatacccttcgaattc
tggaaaaatacggttgattccttaatttcctcagatgccaattctaatattagcctatta
cattatcacaacacatggtttgtagaaaagtctgccaatgtctcttttacttcgttcatg
gaagtagaataa
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