Lepeophtheirus salmonis (salmon louse): 121129883
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Entry
121129883 CDS
T08214
Symbol
shg
Name
(RefSeq) DE-cadherin
KO
K27891
DE-cadherin
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsm04515
]
121129883 (shg)
Cell adhesion molecules [BR:
lsm04515
]
Cadherins
Cadherin related
121129883 (shg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Ig_Shg
CADH_Y-type_LIR
Laminin_G_2
Cadherin_FAT4_N
Laminin_G_1
Cadherin_CELSR2_9th
Fibulin_C
hEGF
EGF
Motif
Other DBs
NCBI-GeneID:
121129883
NCBI-ProteinID:
XP_040581523
LinkDB
All DBs
Position
1:complement(43315707..43332086)
Genome browser
AA seq
1527 aa
AA seq
DB search
MKFSLLLLILLRIGSTFGEADPSIIGGEESLSISAEQVSNRYKPKFDECENYAPEVQEEA
KRGTKVIRVHATDRDGKQNPSGQVTYSIVSTDKKFKIHPESGWLVTDAIFDRDEPQKDKL
VHVTVKASDNGRPQLEDVCTLAVKILDINDNFPVFDRGVYDVVVPRDTQVETQIVRISAS
DVDEGDNQKISYQLKAARVPSDLDYFKWDEKTGAVFLGQMLDKPISSIIELKAKALDSGS
PPKSTEIDITIEVVQSNNKPPSFLQGPGAEIKVSEMYNDYSEAIATYTATSNIEDDPTVF
FQLVSGRTEQTNKDGTFRAVQDQNRPHICKIYLAKQLEYESVTQYTLTLQVRNAPDLVAE
AQLVINVLDKNNQAPIFVNIESGSVLEHEKIGTTVMQVSAIDHDGTYPNNRVYYRIASEE
MKNKFNINPDTGVITTKVEFDREERAVYSLPIIGEDGAASALLKNGQPNSTPLSFRIVIA
DINDNPPYFPHSNYSADVPENQDLGSKVMEVTAKDKDTEASITTYSIKSGNIGGAFSIEE
KTGFIRVASKLDYESIKIYHLVIQAWDGKYSSEGRVDIHISNENDMKPVFSKERYTANLK
EEQIPTYPIFQVSAMDPDIDPGGPQNMSYYLDSNSQTASHFSVNSVTGDLNIIRKLDRDL
PYGFPQWNIYVFAKDENGGPKGIESFVEMVIVLEDINDNSPFLNMPNGLVWYENQGPGIV
GELLADDYDTEENGPPFTFEIDPSANQNLKAKFAVKEYKNNGTFYLETLTSFDRELQKRY
DIPINICDRKKNCGVSKLFVVIGDVNDNPMEPGDSSIFVYNYEGRAPDTTIGRVYVSDPD
DWDLPDKTFRFAEGSDHRGKFDLNRHNGFITMRRGIPLPEEKNHFTMKFLVEDPTHGQTN
EHAVSATVNVTIQKIPEEAVIKSGSMRIVGSPESFILPDENGVSKRDLLVEKLKDWLNAT
YVDVFAVLPYSRYYTDIRFSAHGSPYYPPERLEGSLANRRSELEESLGIEIVMIKIDECL
YEGINCNEGEGCTNYLDIDESPVTVYTNKSSFVGVGAWVKPFCSCSLPDAQKSVSKYKNP
CDHNPCLNGGNCISNGLASYKCECPSSNNGQFGSNCERLAASFNGEGWSWHPSLSACGDS
ALSLSFNTDRDSGTLLYVGPTPGSVVENITDYLALEIEAGRLKMYLNYGSGTKTLSLGQR
IDDGKTHELVMKWTNTSARMELDDNSCTSTGRSDKKNQCFIQISMRKSKNSFLNVNGPLQ
IGGVSFGTNGFQDLLQRLSLKSSEMPYGDGFAGCIRNLTYRAGSRTVLYDLGDPSDGDNY
TPGCDAEFVQAVKALKFYHSYVIVVLVFLACICAAVIVFAIYRKKRIVFSDKDIDCDIRE
NIINYEDEGGGEGDQTGYDLSVLRMMADGTPSLQTVPNVGKLRPDNNSNCDLPDDINLFL
TKVKDQADCDPDSTPFDDLRHYAYEGDGNSNRTLSSLHSGSSDADLEFDYLHSFGPRFKK
LADMYGEEPDSDDEAPALPQAASESWC
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctccttactcctcctcatcctcctacggataggaagcacgtttggagaagcg
gatccctccattattggaggagaagagtcactttctatcagtgcggagcaggtgtcaaat
cgatacaaacccaagttcgacgaatgcgaaaactacgctccagaagtgcaggaagaagct
aaaagaggcacaaaagtaattcgagtccatgcgacggatagagatgggaaacaaaatcca
agtggtcaagtcacttattctatagtatccactgataaaaagttcaaaattcatccagag
tctggatggttagtaacggacgcgatattcgatcgtgatgaaccacaaaaagacaagctg
gttcatgtgaccgtaaaagcctctgacaatggtcgtccacaattggaggacgtctgtaca
cttgctgttaaaatcctagatatcaatgacaatttccctgtctttgatcgcggtgtctat
gacgtcgttgttcctcgtgacacacaggttgaaactcaaattgttcgaatctctgcatcc
gatgttgacgaaggagataatcaaaaaatatcatatcaactcaaagctgctcgtgtccca
tcggatcttgattattttaaatgggatgaaaaaaccggagcagtttttctagggcagatg
ctagacaaacccatttcctctattattgagctcaaagccaaggcacttgactcggggagt
cctccaaaatccactgaaattgatattactattgaagtcgttcaatctaataataagccc
ccgagctttctacaaggtccaggagcggaaatcaaagtttcagaaatgtataacgattac
tccgaggccattgccacatatactgccacatccaatattgaggatgatcccacagttttc
ttccagctagtctctgggcgcacggagcaaaccaataaggatggcacctttcgtgcagtt
caagatcaaaatcgccctcatatttgtaaaatttatctggccaaacaattagaatatgag
tctgtaactcaatatactctcactcttcaagtccgaaatgctcctgatttagttgctgaa
gctcagttagttatcaacgtccttgacaaaaataatcaagcacctatctttgttaatatc
gagtctggaagtgttttagaacatgaaaaaatcggaacaactgtcatgcaggtctcggcc
attgatcatgatggtacttatcccaataatcgtgtgtactatcgaattgcaagcgaggag
atgaaaaacaaattcaatattaatccagacactggtgttattactaccaaagtagaattc
gatagagaagagcgtgcggtatactctttacctatcattggagaagatggagctgcctct
gctcttttgaaaaatggccaacccaatagtactcctcttagttttcgtattgtaattgca
gacatcaacgataatccgccttattttccacattcaaactatagtgcagatgttccagag
aatcaggatcttggatccaaagttatggaggtcactgcaaaagataaagacacagaggct
tccatcaccacatacagcatcaaatcaggaaatattgggggagctttctccattgaagaa
aagactgggttcattcgagttgcgtcaaaattggattacgagtctattaaaatttatcat
ttggttattcaggcctgggatggaaaatattcttcagagggtcgtgtggacattcatatt
agtaatgaaaatgacatgaaacccgttttttcaaaggaaaggtacactgccaatctcaag
gaagaacaaattccaacctaccccatttttcaagtatctgctatggatcctgatattgat
ccaggaggcccacaaaatatgtcgtactatttggattcaaattcacagactgcatctcat
ttctccgtcaattccgttacgggggatcttaatatcattagaaagttagatcgagacttg
ccatatggctttcctcagtggaatatctacgtatttgctaaagatgaaaatggtgggccc
aaaggtattgagagctttgttgaaatggtcatcgtacttgaggacataaatgataattct
cctttccttaatatgccgaacggcctagtatggtatgaaaatcaaggccctggtattgtt
ggagagctcctcgctgatgactatgatacagaggaaaatggaccaccatttacttttgaa
atagatccatctgctaatcaaaatctgaaagctaaatttgctgtgaaggaatacaagaac
aatggaactttctatttggagaccctcacttcatttgatcgtgaattgcaaaagcgttat
gacatacccatcaacatttgtgatagaaagaagaactgtggtgtgagtaagttgtttgtt
gtcattggggatgtgaatgataatcctatggagccaggagatagcagcattttcgtgtac
aactacgaaggaagagctccagatacaactattggaagagtctatgtgtcggatcctgat
gattgggatcttcctgacaaaacgtttcgatttgcagagggatccgatcatcgaggtaaa
ttcgatttgaatcgacataatggatttataacaatgagaagaggtattcctctccctgaa
gagaaaaatcattttacaatgaagtttcttgttgaggatccaacacatggtcagacaaat
gaacacgcagtgtctgccactgttaacgtaaccattcaaaagattccagaagaggccgta
atcaagtcaggatccatgagaatcgtaggaagtcctgaatccttcattcttcccgacgag
aatggagtatcgaaacgggatcttcttgttgaaaaacttaaggactggcttaatgctacg
tacgtagatgtttttgcagttcttccttattcaaggtattacacggatattcgtttctcg
gcccatggttcaccatattatccaccagaaaggttagaaggctctttggccaatagaaga
tcagagttagaagagagtcttgggattgaaattgttatgatcaaaattgatgaatgttta
tatgaaggtattaattgcaacgaaggagaaggctgcacaaactatctcgatattgacgaa
tctcctgtgacagtatatacaaataagtcttcctttgttggtgttggtgcttgggtcaag
cctttttgtagctgcagtctaccggatgctcaaaaaagtgtttctaagtacaaaaatcca
tgtgatcataatccatgtttaaatggtggtaactgtatctcaaacggactggctagttat
aagtgtgaatgtccttctagtaataatggacagtttgggtccaattgtgaaaggcttgct
gcttcattcaatggtgagggatggtcgtggcacccatcattatctgcctgtggagattct
gctctatctttgagcttcaatacggacagagatagtggaacactcctctacgttggacct
actccaggatctgtcgttgaaaatattacagattatctagcacttgaaatagaagcggga
agattgaaaatgtatttaaattacgggtctggcacaaagacattgtccctcggacaaaga
attgatgatggaaagactcatgaactagtgatgaaatggacgaatacatctgcaagaatg
gagcttgatgacaattcctgtacttcaactggtcgaagtgataagaaaaatcaatgcttt
attcaaatatccatgagaaaaagcaaaaattccttcttgaatgtaaatgggccacttcaa
attggaggagtttcctttggcacaaacggattccaggacttgcttcaacgattaagtttg
aagagttctgagatgccgtatggtgatggttttgcaggctgtatacgaaatttaacttat
cgagcaggctctcggacggtgttatatgatttgggggatccctctgatggagataattat
actcctgggtgtgatgcagagtttgtacaggcagtgaaagctctcaagttttatcactct
tatgttatagtcgttttagtttttcttgcctgcatttgtgcagcagtcattgtctttgca
atctacagaaagaagagaattgtatttagtgacaaggatattgattgcgacattcgagaa
aacatcatcaattacgaggatgaaggtggtggcgaaggagatcaaacaggctatgatcta
tctgttttaagaatgatggcagatgggactccatccttacaaaccgtcccaaatgttggc
aaattacgtcccgacaataactcaaactgtgatcttccagatgatattaatttattcctt
acaaaagttaaagatcaggcggattgcgatcctgattcaacgccatttgatgacctccgt
cattacgcatatgaaggagatggcaactcaaatcgaacactctcctcgcttcattctggc
tcaagtgatgctgatttagagtttgactatctccatagttttggtcctagatttaaaaaa
ttagcagatatgtacggtgaagaacctgactcagacgatgaggctcctgctctacctcaa
gcagcctcagaatcatggtgctga
DBGET
integrated database retrieval system