Lepeophtheirus salmonis (salmon louse): 121130047
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Entry
121130047 CDS
T08214
Symbol
PolrMT
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
lsm03029
]
121130047 (PolrMT)
Enzymes [BR:
lsm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
121130047 (PolrMT)
Mitochondrial biogenesis [BR:
lsm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
121130047 (PolrMT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-GeneID:
121130047
NCBI-ProteinID:
XP_040581681
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All DBs
Position
1:complement(43392336..43396247)
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AA seq
1161 aa
AA seq
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MRMFRLIGTSRKLASIRALGSRPQSQRVYKVNKAKKLDLNEIRSNQSRILSYHQKGNLAE
AGVLLSPLSKDSSTSESNSKRKCLKDSPSLTSTLCAYVDCMLQVGELYLVSKAIQLASFS
LSFIPLPVLLNFLRALATQGQHPNEFIKIWNKYETQEKLCRPNNWYEPRAFMSFAICVGK
FENFPYKHVEKPPHPQFMNYVINESLYLNSENRAHFLKGIQQLEWLPSSSSSNLEQPRYQ
VKILSDLMFTRVKDSQITSQLSGYIKSDLMNSYKIQLETEKKGFTIIDSILHATEEVDTL
KAVELVREELCNEWKTKIKASLKTRLSRLKSTELGAKKLNSMSGYPFLSVLPLDTLADVA
VEEATRLLTQSETYCPSVYFIQTDLGKKVFRRLEVASNLDPDFIKSFESTYSSYCDWYLN
PEASEWWCHREALLGISKTETYRHPERPVQGWTHAIHIFVGKELLKAIMDNVLVRLDHGF
YIHFGSKGQKIKFTAKNYPIFKNSLEKEEHPIPPLCPGLYKIYRQRKFSQVEEIKPHPIL
AKLFNYAKLSSLKFNTNELPMIAPPLPWISSSRGGYLLTNSEFIRTGEMADDSKNKEISI
YDISEESQQNVKPVMDSINILGSTPWKVNTKLLDLAIELFNSKKEEHILLIRKLDIPRHP
DNLCAPELDPHVLQKVQANTSLSVKELELYKSFSINKQVFLRIKNENYSLWCDCLYRLSL
ANHFRNNILYFPHNLDFRGRVYPIPPHFNHMGGDLPRSLLVFAKGRPLGHDGLKWLKLQA
VNMTGLKKRCSVHERLQYADEILPDILDSAVNPLTGKKWWIESEDPWQTLSVCNEIKAAL
DSGDPKNYTTHIPIHQDGSCNGLQHYAAIGRDVLGAGSVNLIPNELPQDVYSEIATLVEK
KRASDSNSRDIARILEGYVKRKVIKQTVMTTVYGVTAYGARLQIARQLKDIEDFPSEYVE
EASKYLAVKTFDSLNELFTASQEIQLWLTESATVISKIFGANVEWETPLGLKVIQPYRKA
LKGGNKSNNLWGSSTAKRDTVNSAKQRNGFPPNYIHSLDSSHMMLTSLHLWNSGVTFASV
HDCYWTHPITVYKMNESCREQFINLHSQPLLENLSDSFKNRYMNSSTNKVDTAKAVLLFK
NIPSKGSLDLNVVRNSVFFFS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgtttcgacttattgggacttcacggaaacttgcatcgatccgtgcattagga
tcaaggccccaatctcaacgtgtttacaaggttaataaagctaagaaattggatttgaat
gagattcgaagtaatcaatccaggattttgagctatcatcaaaagggtaatttagccgag
gccggagttttactttctcctctgagcaaggatagtagtacatctgaaagcaatagcaaa
cggaagtgtttaaaggatagcccctctttaacttcaacgctgtgtgcctatgtggattgt
atgctccaagtgggtgagctgtatctcgtttctaaagcaattcaacttgcttccttttcc
ttatccttcataccactccctgttctcttgaatttcctaagagcccttgctactcaggga
cagcatcccaatgaattcataaaaatttggaacaagtatgaaacgcaggaaaagctgtgt
cgtccaaataattggtatgaaccaagagcttttatgagttttgctatttgcgttgggaaa
tttgaaaactttccatacaaacatgtagaaaaaccgccacatcctcagtttatgaactat
gtcataaatgagtccctatatcttaattccgagaatcgtgcacattttttaaagggaatt
caacaacttgaatggttaccttcttcgagctcttcaaacttggagcaaccccgctatcaa
gtcaaaatactttcagatcttatgtttactcgtgtaaaagactcacaaattacttctcaa
ctgagtgggtacatcaagtcagacctcatgaactcatataagattcagttagaaacggag
aagaagggattcacgattattgattctattcttcatgctactgaagaagtggatactctc
aaagctgttgaattagtcagagaagagctttgcaatgagtggaaaactaaaattaaagcg
tcgctcaaaactcgtctaagtcgcctcaaatctactgaattgggggctaaaaaattaaat
agtatgtctggctatccctttttgagtgttttgcctttagatacattggctgatgtagct
gttgaggaagctacgcggttattgactcagtcagaaacttattgtccttctgtatatttt
attcaaacagatttaggtaaaaaagtgtttcgaaggttggaagtggcgtccaatcttgat
ccggattttataaagtcttttgaatctacgtattcttcatactgtgattggtacctgaat
cctgaagctagtgaatggtggtgtcatcgtgaagcccttcttgggatatcaaaaacagag
acatatagacatcctgaacgcccagttcaaggttggactcatgctatacatatttttgtg
ggaaaggaattgttgaaggctattatggacaatgttttagtgaggttagaccacggattt
tacattcattttgggtcgaaagggcaaaaaataaaatttacagcaaaaaactatcccatt
tttaaaaattcacttgaaaaggaggaacatcctattcctccactatgtcctggattgtac
aagatatatcgtcaaagaaaattctctcaagttgaagaaattaaacctcatccaatattg
gcaaagctctttaactatgccaaactctcttcacttaagtttaatacaaatgaactacct
atgattgctcctcctttaccctggatatcatcctccagaggagggtatttactcactaat
tcagagtttattagaactggtgagatggcagatgactcaaaaaataaagaaataagtata
tatgatatatctgaagaatctcaacaaaatgtcaaaccagtaatggactctataaatatt
cttggatcaacaccttggaaggtcaatactaaattacttgatttagctatagagttattc
aactccaaaaaagaagagcatattcttttaattaggaaattagatattccaagacaccct
gataatctctgtgctcccgaattagaccctcacgttctgcaaaaggttcaagccaataca
tctctctcagtgaaagaacttgaactttataaaagtttttcaatcaacaagcaggtgttt
ttgcgaattaaaaatgagaattactcactctggtgtgattgtttatatcgtttgtcgctt
gcaaatcattttcgaaataatattctttacttcccccataatttggactttcgcggacga
gtttatcctattcctccacattttaatcacatgggtggagatcttcctcgttccttactt
gtcttcgccaagggtcgtcccttagggcacgatggtttgaaatggttaaaactacaggct
gttaatatgactggtttaaaaaagcgttgctctgtccatgagagattacagtatgctgat
gaaatccttccggatatcttggactcagctgttaatcctctcactgggaagaaatggtgg
attgagtcagaagatccatggcaaactctctctgtttgtaatgaaataaaagcagctcta
gactcaggagatcctaaaaactatactactcatatacctattcatcaagatggatcatgc
aacggtcttcaacattatgctgccatcgggcgggacgttttgggagctggtagtgttaac
ttaataccaaatgagcttccgcaggatgtctattcagaaatagctacactggtcgaaaag
aaacgagcttccgattcaaacagtcgtgatattgcccggatccttgaagggtatgtcaaa
cgcaaggttataaaacaaactgtaatgactaccgtgtacggagttacggcatatggggct
agacttcaaattgctcgtcaattaaaagacattgaggattttccttctgaatatgttgag
gaagcatcaaaataccttgccgttaagacttttgactcattaaatgagctttttactgcg
tcacaggaaattcaactatggctcacagaatcagcaacggtcatttcaaaaatctttgga
gctaatgtagaatgggaaactcctttaggtttaaaagtaatacaaccttatcgaaaagct
ctcaaaggaggtaacaaatcaaataacctttggggatcctctacagcaaaacgggatact
gtgaactctgccaagcaacgaaatgggtttcctcccaattatattcattctcttgattct
tctcatatgatgcttacttctcttcatttgtggaatagcggagttacttttgctagtgtt
catgactgctactggacgcatccaatcactgtttataaaatgaatgagtcctgtcgtgaa
cagtttatcaatttacattctcaaccccttcttgaaaatctttcagactcttttaaaaat
cgttatatgaatagttctacaaataaagtagatactgctaaggccgtactcctatttaaa
aacataccctccaaaggatcattagatcttaatgttgtgagaaattctgtatttttcttt
agttaa
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