Lepeophtheirus salmonis (salmon louse): 121130081
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Entry
121130081 CDS
T08214
Name
(RefSeq) uncharacterized protein
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121130081
Transcription factors [BR:
lsm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121130081
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
DUF7700
Motif
Other DBs
NCBI-GeneID:
121130081
NCBI-ProteinID:
XP_040581719
UniProt:
A0A0K2UNH9
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Position
Z:11168612..11181164
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AA seq
391 aa
AA seq
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MAFYQNFPCQPVAFTMGDFSTRVEDREALDKRKRNERIRRPMNAFMVWAKVERKRLADEN
PDLHNADLSRMLGTKWKSLTPAERAPSVQEAERLRLKHMQDFPHYKYRPRRKKKERSKGD
KPSEGNNSASSSYSPNFHGHEGSSTDKSCLSVDTPEPSPNEGSSDYFSTSHQITFMPTPE
TSPQLSSSSMTYNNSTSNNNNNNSRGNPDHSSSFNVSQQSSSASDMCGMEEVAYQYPNYG
DAYFWKNYDHLGFNYATGGYRAPPPHHVPSGVAATSKWASDPHIQTCGVDYSGSNGSNSS
STSSGGHNADMNLNRYGKLYAQQSPSLQDSTTAAALYNPHQNQWLGAGGSSSGGENISSF
GFAIAGVREPHSHLHSYHPSTHHPHPPHHES
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcattctaccagaatttcccatgtcagccagtggcatttacaatgggggatttcagc
acaagagtagaagatagggaagctttggataaaagaaaaagaaatgaaaggataaggaga
cccatgaacgccttcatggtatgggccaaagtagaaagaaaaagactggcagatgaaaat
ccggatttgcacaatgcggatttatctcgcatgctcggtacaaaatggaagtcattaact
cctgcagagcgtgcaccgagtgttcaagaagcagagcgattacgattaaaacacatgcaa
gacttcccccattataaatatcgtccaagacggaaaaaaaaggaacgatctaagggggat
aagccaagcgaaggtaacaatagtgcctcctcttcatactctccaaatttccatggccac
gagggaagttcaactgataaatcctgtctctcagttgatactccagagccttctccaaat
gaaggttcctcagattatttcagtacgtctcaccaaataacatttatgccaactccagaa
acctctcctcagctctctagctcttcaatgacttataacaatagtactagtaataacaac
aataataactcacggggaaatccggatcattcttcatcatttaatgtatctcaacaaagc
tcatctgcatcagatatgtgtggcatggaggaggtagcctatcagtatcctaactacggg
gatgcttacttctggaaaaactatgatcacttgggattcaactatgctacaggaggctat
agagcaccacccccgcatcatgttccatctggggttgctgcaacaagtaagtgggcttcc
gatcctcatattcaaacgtgtggtgtggattacagtgggagtaacggaagtaacagtagc
tccaccagtagtggcggccataacgcggatatgaatttgaaccgctacggaaagctctat
gctcaacaatcaccctctcttcaagactcaacaacagcagcagctctatataatcctcac
caaaatcaatggttaggagctggggggagtagcagtggaggagaaaatattagttctttt
gggttcgctattgctggcgtgagagagccacactcccatcttcactcctatcatccctct
actcaccatccccatcctccacatcacgaatcatga
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