Lepeophtheirus salmonis (salmon louse): 121130152
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Entry
121130152 CDS
T08214
Name
(RefSeq) E3 ubiquitin-protein ligase MIB2-like isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121130152
Enzymes [BR:
lsm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121130152
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121130152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
MIB_HERC2
Ank
SH3_15
Ank_4
Ank_3
Ank_5
zf-C3HC4_3
ZZ
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
121130152
NCBI-ProteinID:
XP_040581824
LinkDB
All DBs
Position
1:44052455..44058902
Genome browser
AA seq
1047 aa
AA seq
DB search
MKNGHSCDFSSTSDKQFDDGFTTTSSSYLFNEKNKRKSLLIPNNKEECFNLENFIESLQA
LLEKDSSFHVSNYRTMIASLGIRVVRGPDWKWGEQDDGIGHAGTVVEFGRSGSNTSPDGT
VVVQWDSGIRTNYRMGFQKAYDLRIYDIAASGVQHPNHSCVYCKTRILGYRWSCSSCPEL
DYCNGCYNSDIHDLSHSFIRIDTPTSVPVQVPPRKKSLKIPLRGIFKGAWVHRGHDWDWG
AQDGGEDNIGIVLDVSGWDEESGRSVVTVKWNSTFSTNVYRLGHKGKVDVKYVSGKQAFH
GFYYPEHLPILGDKKYSGSSSNSQSGSGVVSLGFSVGDKVKIKVDAANFKNLQNGFGGYS
PRMTELIGQIGIIHRFTDKGAVRVQYPGRPIENHRWTINPKALVKVTMFTIGTIVRIIND
CDKVRRLQEGHGDWIESMKSVIGKMGRVVKVYPDRDVRVSIMGNTWTFNPTCLVIVPGSR
LDIDNRADEFEGEGETSHRRSNPSHLNLSEDNLLSSAFHGQLNCLKEELHKVNDIKTVRS
ALKVGAERGHLDIVKYLVNQYPDEVDLKVDGNTALHAATHQGHQEIIETLLASGANIATT
DDNGDCALHYAVLGLRPNILDYLLSKSGSSVINAVNKKCCTALHVGVLKQSVESVKILLK
HNIDVNAQDSYKDTALHEAMVLNNTSIIELLVNYPKTDFRLKNSRDFNCLQFAALKGNTT
ALKSILVKARQLAEVKKSDGFSPLHLAALNGHYSIVKILLKVGKCSVDIFDNRGQNPLHL
ASGQGHAAIVELLVNHVKDNQKLLLSLLESQDSEGQTPLHLALGREGSVEPLDPLQAPEM
NRILGGVLTAAVKPELQRSLTIAIFLSKNGASLSKRNMSGLVPQDLIPDPVLRNLLMNKK
SIIHKSSSPSRESVGIEYQVECLICTELSSQLITFRPCGHRVVCIECWTPRIKKCLDCKA
PLSHKTESRIPSKSTSNISKKDYLLPRMRDLEAKVRDFEDQFLCTICMERKKNVAFQCGH
SACEICVETLRSCHMCRGPVDRRINLY
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacggtcattcttgtgatttttcgtcaaccagtgataaacaattcgatgatggt
ttcactactacttcatcaagttatctctttaatgagaagaataaacgaaaatcgttgcta
attccgaataacaaagaagaatgttttaatttggaaaatttcatagagagtttgcaagct
cttttggaaaaggattcatcctttcatgtctccaattatagaaccatgattgcaagctta
ggtattcgagttgtgagaggccctgactggaaatggggtgagcaggatgatggtattggc
catgctggtacagtggttgagtttggacgatcaggatctaatacttctcctgatgggaca
gttgtagtacaatgggattcagggattcgtaccaattatcgtatgggctttcaaaaggcc
tatgatcttcgtatatatgatattgcagcctctggagtccaacatcctaatcattcctgt
gtttattgcaaaactcgaatacttggctatcgctggtcctgttcatcgtgccctgaatta
gactattgcaatggttgctataattctgatatccatgatctaagtcattcgtttataaga
attgacaccccaacttcagttcctgttcaagtacctcctagaaaaaaatcattgaaaatt
ccacttaggggcatctttaagggagcatgggtccatagaggtcatgattgggactgggga
gctcaagatggtggagaagacaacattggtattgtattagatgtgtcgggatgggatgaa
gagtctggaagatctgttgttactgtgaaatggaattcaaccttttccaccaacgtttat
cgtcttggacacaaaggcaaagtagatgttaaatatgtatcaggaaaacaggcttttcat
ggattctactatcctgaacatttaccaattcttggcgataaaaagtacagtggaagttca
tccaacagccaatcaggaagtggagttgtatctttgggatttagcgttggagataaagtt
aaaatcaaagtagatgctgccaattttaaaaaccttcaaaatggatttgggggttactct
ccccgaatgacagagctcattggacaaataggcattattcatcgctttactgataaagga
gctgttagggtacaatacccaggtaggcctatagaaaaccatcgttggacaataaatccc
aaagctttggttaaggttacgatgtttactattggaacaatagttcgcataattaatgac
tgtgataaagtcagaagactgcaagaggggcatggagattggatagagagtatgaagagt
gttatcggaaaaatgggtcgagttgtcaaagtatatccggacagagacgtgcgtgtttct
atcatgggcaatacgtggacgtttaatccgacttgcttagtcattgtccctgggtcacgt
ttagatattgacaatagagcagacgaatttgaaggcgagggagagacgtcgcatcgtcgg
agtaatccttcacatttaaatctttccgaagataatttattaagctcggctttccacggt
caattaaattgtctcaaagaggagcttcataaagtaaatgatattaagactgttcgctct
gcattgaaagttggagccgaaagaggacacttagatatagtcaaatacttggtaaatcaa
taccccgatgaagttgatctcaaggttgatggaaacactgcacttcatgcggcgacacat
caagggcatcaagaaatcatagaaactttattagcctctggcgcaaatatagctacgacg
gatgataatggtgattgtgctttacattatgctgtattgggtttaagacctaatattcta
gattaccttttaagtaaatcaggttcctcagtcataaatgctgttaataagaaatgttgt
acagctcttcacgttggagtcctcaaacagagcgtggagtctgtgaagatattacttaaa
cataatatcgatgttaacgcacaagactcatacaaagacaccgcccttcatgaggctatg
gtacttaacaatacctccatcatagaattacttgttaactacccaaaaacggatttccga
ttaaaaaatagtagagattttaattgtcttcagtttgctgctctcaaaggaaatactact
gccttaaaaagtattctagtcaaggctaggcaactcgctgaagtaaaaaaatccgatgga
ttctcccctctacatcttgctgccttaaatggacattattccattgttaagatcctttta
aaagttggaaaatgttcggttgatatttttgataatagaggacagaatcccttacatctt
gcatcgggccaaggtcatgccgctattgtcgagctcttagtcaatcatgttaaggataat
caaaaactccttttatctcttcttgaaagtcaagatagtgaaggtcaaactcctcttcac
cttgcacttggtcgtgaaggatcagtcgaaccattggatcctcttcaagccccggagatg
aatcgaatcttaggtggggttttaactgcagctgtcaaaccagagttacaaagaagttta
accattgccatatttctctctaaaaatggagcgagtttatcaaaaaggaacatgagtgga
ttagttcctcaagaccttattccagatccagtgctacggaatttactcatgaataaaaaa
tcaattattcataagtcttcttcgccctctagggaatctgttggaatagaataccaagtg
gaatgtcttatatgtacagagttgagttctcaattaattacttttcgtccatgtggacat
agagttgtatgtattgagtgttggacaccacgcattaagaaatgtttggactgcaaagct
cctttatcacataaaactgaatcccgcattccttctaaatccacttctaatatatctaaa
aaggattacttattaccccgtatgcgggatttagaagctaaagtaagagattttgaggat
caatttttgtgcacaatatgtatggagagaaagaaaaacgttgcatttcaatgcggacac
tctgcctgcgaaatttgtgttgaaacgttgagatcttgtcatatgtgtagagggccagtc
gataggaggatcaatctctattaa
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