Lepeophtheirus salmonis (salmon louse): 121130209
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Entry
121130209 CDS
T08214
Symbol
Chmp1
Name
(RefSeq) charged multivesicular body protein 1a
KO
K12197
charged multivesicular body protein 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03272
Virion - Hepatitis viruses
lsm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121130209 (Chmp1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121130209 (Chmp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121130209 (Chmp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsm04147
]
121130209 (Chmp1)
Membrane trafficking [BR:
lsm04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
121130209 (Chmp1)
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121130209 (Chmp1)
Exosomal proteins of other body fluids (saliva and urine)
121130209 (Chmp1)
Exosomal proteins of colorectal cancer cells
121130209 (Chmp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
Ist1
Acyl_transf_2
Phage_holin_6_1
DUF4363
NPIP
RADX
ORC3_ins
Motif
Other DBs
NCBI-GeneID:
121130209
NCBI-ProteinID:
XP_040581903
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All DBs
Position
Z:13345759..13348841
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AA seq
200 aa
AA seq
DB search
MGAEGSKQLEDSMFQLKFTAKSMSRLSKNAEKEAKEQERKVKKSLENGQVEMARIYAENA
VRKKNESINYLRMSAKVDAVASRVQSAHKMKGVSHSMRNVVNSLEKAVNSMELQKISETM
DKFESQFEDLDVKTSVMEDTMGSATTLSTPQHAVDDLIKRVADEAGLEVSEQLANAPSTT
VGEATTDQDALSKRLAALRE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgggagcggaggggagcaagcaactggaggactccatgttccaactcaagttcacagcc
aagtccatgagtcgcctctccaaaaatgctgagaaggaagcaaaggaacaggaacgtaaa
gtaaaaaaatccctagagaacggacaggtcgaaatggcacggatctacgcagagaatgct
gttcgtaagaagaacgagtccatcaactacctacggatgtcggctaaggtggatgccgtt
gcttctagggtgcaaagtgctcacaaaatgaaaggagtatcacatagcatgagaaatgtt
gtaaattcattagaaaaagcagtgaattctatggaattacaaaagatctctgaaacaatg
gacaaatttgagagtcagtttgaggatttagatgtgaaaacttcggtcatggaagacaca
atgggatcggctacaacattgtctactcctcaacatgcagtggatgatttgattaagaga
gttgctgatgaagctggtttggaagtatcggagcaattagcgaatgccccaagtacgacg
gttggtgaagcaacgacggatcaagatgcactcagtaaacgccttgctgctttgagagaa
taa
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integrated database retrieval system
