Lepeophtheirus salmonis (salmon louse): 121130333
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Entry
121130333 CDS
T08214
Name
(RefSeq) ATP-dependent DNA helicase DDX11
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121130333
Enzymes [BR:
lsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121130333
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
121130333
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Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
121130333
NCBI-ProteinID:
XP_040582026
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Position
1:43701379..43704348
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AA seq
832 aa
AA seq
DB search
MDPIPTPESFPFPYDEPYPIQKDFMKSLFRCLDDGKLGIFESPTGTGKSLSLICGTLLWF
KQREEARKKYLKNRIEEKSDVNSDGEEDWFSVALRNRAKNEEKLEYKLELKFLEEKQQRL
EEIRQKSKLKKDVQFHHYYEKKGSSMSDINENEDEDHDLVLNDYSSGEEDGGDENYPPED
QVDYSQRIYYCSRTHSQLSQFVKEVKKSPYADSIRLISLGSRKNACINDSVRKLKHNASM
NEKCIDLQKGLQKTQVDKDKRASKKKKTTNGCPFYSQIRIEALKNMALTQISDIEDLVSK
GKKTQTCPYYSSRHASEDAELVVIPYNTLLHKSTREACGIKLKNSVLIIDEAHNLLETIA
HIHSCEIKGSHLKDIKFQLQGYLEKFRTRLKPRNILYIKQLIFIVTNFIKVMTSSQILTT
MAFLQDSQIFNIDLFKILRYILKSKLSYKLRGFSQKYSNEAQKPSNTQTFLNSMKKNYKE
ESPAQGVRPETESDHSDGPSQINILFSFISNLVEDLDDGRVVITHSNDFSGSSIKFILLN
PTNHFKDLVKECHSIIVAGGTMEPVDEFKKRLFISSGATTERIHHFSCGHIIPESNILPI
VLHRGPSGKLLDFSFSLRDLKETYEEILRILSNLVTIIPGGIVVFFPSYHYETKVHAFLS
KSSTWNNLVAKKKKLYREPKNSDAVEEVLKAYSNSVQNSDGAILFSVVGGKMSEGINFSD
DMGRCVLMIGLPFSNSKSPELKAKMEYLNRTEGSNAGNSYYENSCMKAVNQSIGRAIRHG
NDYATIILADHRYSRGNIHELLPGWIRDKVWNSDKFGPVVPRIRQFFKSKSV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggatcccattcctactccagaatcatttcctttcccatatgatgaaccctatcccata
caaaaagactttatgaaaagcctttttagatgtctggacgatggtaagttgggaatattc
gagtctccaactggaactggaaaatcattgagtttaatttgtgggacccttttgtggttc
aaacaaagggaagaagctcgaaaaaaatatttgaaaaataggattgaagaaaaatctgat
gtaaatagtgatggagaagaggattggttctctgtggcgcttcgaaatcgtgcaaaaaat
gaggagaaattggaatataaattggaactcaagtttcttgaagagaaacaacaaagactc
gaggagatacggcaaaagtcgaaattgaaaaaagacgttcaatttcatcattattatgag
aaaaagggatcctccatgtctgacattaatgaaaatgaggatgaagaccatgacttggtc
ttgaacgattattctagtggcgaagaggatggaggagacgaaaattatccgcctgaagat
caagtggattatagtcaacgaatatattattgctccagaacccattcacaactcagtcaa
tttgtcaaagaagtcaaaaaaagcccttatgcggatagtattcgcttaatttccttaggt
tctcggaaaaatgcctgtatcaacgattcagtccggaagttaaaacataatgcttccatg
aatgagaaatgtatcgatttgcagaaaggtttgcaaaagactcaagtcgataaggataaa
agggcatcaaaaaaaaagaaaactacaaatggatgtcccttttactcacaaataaggatt
gaagccttgaaaaacatggcgttgactcaaatatcggatatagaagatttggtttccaaa
ggtaaaaaaactcaaacatgtccttattatagctctagacatgcctcggaggatgctgag
ctagttgtgattccctataatactctcctacataagtcaacccgtgaggcatgtggcatt
aaattaaaaaattctgtgcttatcattgacgaagcacacaatctcctggaaacaatagct
catattcacagttgtgaaatcaaaggaagtcatttgaaggatatcaaatttcaattacag
ggttacctcgaaaaatttcggacacgtttgaaacccaggaatatactctatatcaaacaa
ttgatatttattgtgacaaatttcatcaaagtcatgacttcaagtcaaattcttacaacc
atggcctttttgcaagattctcaaatctttaatattgatctttttaaaatcttgcgatat
atattgaagagcaaattatcttataaactccgaggattctctcagaaatattcaaatgaa
gctcaaaaacccagtaatactcaaacttttttaaattcgatgaaaaaaaattacaaggaa
gagtctcctgctcagggcgttcgcccagaaacagagtcagatcattcggatggaccatcg
cagataaatattctatttagttttatatccaatttagtagaagatcttgatgatggaaga
gttgtgattactcattcaaatgatttctctggttcatccatcaaattcatcctactcaac
cctactaatcactttaaggacctcgtaaaggaatgtcattccataattgttgctggaggc
acaatggaaccagtagatgaatttaagaagcgtctttttatatcatcaggggcaactacg
gagaggatacatcacttttcgtgcggacacataattccagaaagtaatattttacctata
gttcttcatcgcggaccttctggaaaacttttggatttttccttttccttgcgtgattta
aaagagacatatgaagagattttgagaattttaagcaatttagtaacaattataccagga
gggatagttgtgtttttcccatcttatcattatgagacaaaagtacatgcatttttaagc
aagagcagtacatggaacaatttagttgctaaaaaaaagaagttatatcgagagcccaag
aattcagatgcagtggaagaggtgcttaaggcttattctaatagtgttcaaaactcggat
ggtgcaattttattcagtgtcgtaggtggtaaaatgagcgagggtattaattttagtgat
gatatggggcgatgcgttctcatgataggccttcctttttccaactctaaaagtccagag
ctaaaagcaaaaatggagtatttaaatagaactgaaggctcaaatgctggaaatagttat
tatgaaaattcatgtatgaaagccgtgaatcagtctattggacgtgcaattcgacatggt
aatgattacgcaacaattattcttgcggatcatagatactctagaggaaatatacatgaa
ctgttaccgggttggataagggacaaagtatggaatagtgataaatttggacctgttgtt
cctagaattagacagttttttaagagtaaaagtgtataa
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