Lepeophtheirus salmonis (salmon louse): 121130572
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Entry
121130572 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: ionotropic receptor 25a-like
KO
K05313
glutamate receptor, ionotropic, invertebrate
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsm04040
]
121130572
Ion channels [BR:
lsm04040
]
Ligand-gated channels
Glutamate (ionotropic)
121130572
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF5337
Ni_hydr_CYTB
F-actin_cap_A
Motif
Other DBs
NCBI-GeneID:
121130572
NCBI-ProteinID:
XP_040582253
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Position
Z:788727..803589
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AA seq
884 aa
AA seq
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MSKTRVYSSAILAILVSLVVGQNPKIFVINRDNLMDLGLNLSQILSSVASSSQKGVTFEQ
IQWKESLSTKEIRELICNKIKEGGSSLYGIVDARVQGSTKSQLSFMSAYGVPYFKLDLAK
NLLLKAIESLLFYMKFTDISFVVEDEXALNETIFFVLGQTNLRTTGTDLTNPNAALRLQK
MRPSSTNYISWGKTSELVDIYRRASSANILKNDVTWVFVHTDFDYDDFNQTELLNMVRFF
TFDKNTCCGLADEEGCSCKKWTKGADEYLAHTFFDIIVEAVSQTDKKIVPPSWDCSSNLP
KQYSKHFYSVITNVTEKTKYFGFKQGKSEGSSIYFPLKIDINDKNQSDTMNVGEWRNKFK
INPDFSISKLNKIYRVGLVLGLPWAYFEFPNGTKTADLSVLDNSLEPKLEGYFPSLLQEL
QKRMIFRYELVVSERYGTRLNNGTWTGIVSKLVSGEIDICLANLIMTTEREEVIDFITPY
IDMSGISIIIRKKKTAQSIFKFMTVLKLEVWIGTLIAVGVVTILIWILEKFSPYSYSNAK
HLYPEGGRNFSFGESLWFAVTSLTPQGGGECPKALSGRILVAAYWLFIVLMLATFTSNLA
AFLTVERLEKTIQSMEELIRHPKITYTVSDSTIVHQHFINMANAERILFEKWKNLTLNSG
AQTQSEFRVWDYPIQEQYFHILQVINRVGTVTNPKEGFDRVEAATDGDFAFLHDTLEVKF
HYYENCNFILVGQPLAEQPVSIAVQQGSRLKRPLSKAILSLQKERYFEKLTKKYWNIAKR
DLCPVLDESQGITLRSLGGIFLAALAGLALSMIVLAVEVWKQKQQRDRQEITKPQKGNSK
DDIMKVGTRKIRVTPMSTPLDTISNNETRSRRKSRSNYPFNNYY
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacaagagtatattcatctgctatattagctattttagtgagtctcgtagtc
ggtcaaaatcccaaaatttttgtaatcaatcgagacaatttgatggatctgggtctaaac
ctctcacaaatactgtcttccgtagcatcatcgtcccaaaaaggcgtcacttttgaacaa
atacaatggaaagaaagtttgagcaccaaagagattcgagagctcatttgtaacaagatc
aaggagggcggaagctctttgtatggtattgtagatgcccgagttcaaggatctactaag
tctcaactcagtttcatgagtgcatatggtgtcccttacttcaagttggacctagcaaaa
aaccttctgcttaaggccattgaaagtcttcttttctacatgaaatttacagatatctca
ttcgttgtggaagatgaanaagcattaaacgaaacaattttctttgtactaggtcaaacg
aatctacgaaccacgggaacggatttaacgaatccgaatgctgcattgagacttcaaaaa
atgcgtccctcctccaccaattatatttcctgggggaaaacatctgagcttgtggatatt
tatagacgtgcttcatcagccaatatacttaaaaatgacgtcacatgggtatttgttcat
acggattttgattatgatgattttaatcaaacagagcttctgaatatggtaagattcttt
acttttgataaaaatacttgctgcggacttgcagatgaagagggttgttcctgtaaaaaa
tggaccaaaggagctgatgagtatttggcccatacattttttgatattattgtcgaggct
gtatcccaaactgacaaaaaaatagttccaccatcctgggactgctcctcaaatttacct
aaacaatattcgaagcatttttactcagtaataaccaacgtcactgagaaaaccaagtat
tttggttttaaacagggaaaatccgagggctcaagtatatactttcccttgaaaattgat
atcaatgacaaaaatcagagtgataccatgaatgttggggaatggagaaacaaatttaag
attaacccggacttttctatatccaaattaaataagatttatcgtgttggcctagtcttg
ggtttaccctgggcttactttgagttcccaaatggaactaaaacagccgatttgagcgtt
ctagataactcattggagcccaaacttgagggatacttcccttcactcctacaggagctt
caaaagagaatgatctttagatatgagttggtggttagtgagagatatgggacacgactg
aacaatggaacatggactggtattgtgagcaaactggtctctggggaaattgatatttgc
ttagctaatttgatcatgacgacagaacgggaggaagtgattgattttatcacaccttat
attgatatgtcagggatctcaatcattattcgaaagaagaaaactgcgcaatcaattttt
aaatttatgacggttttaaagttggaggtctggattggaaccctcattgcggtgggggtt
gtaacaatactcatttggatactggagaaattttcaccctattcatattctaacgccaaa
catttataccctgaaggaggtagaaacttttcgttcggagaaagtctatggtttgcagtt
acgtcactaactcctcagggtggaggggaatgtcctaaggcattaagtggaagaatactc
gttgctgcttactggttattcatagtactcatgcttgccacatttacatccaatttggct
gccttcctcacagttgaacgtctagaaaaaactatccaatccatggaggagctcattcgt
catcccaaaataacctataccgtctccgactcaacaatcgtacatcaacattttatcaac
atggcaaatgcggagcggattctatttgagaaatggaagaacttgactctcaactccgga
gctcaaacgcaaagcgaatttcgtgtttgggattatcccatacaagagcaatattttcac
attctacaggtcattaatcgagttggaactgtgaccaaccccaaggagggatttgatcgt
gtagaagctgcaacggatggggattttgcctttttgcatgatacgctggaagtcaagttt
cattactatgaaaactgtaattttatccttgtgggtcaacctctggctgagcagccggtt
agcattgctgttcaacaagggagtcgattgaagcgccctctgagtaaggctatcctctcc
ttacagaaggaaagatactttgaaaaattaacaaaaaagtactggaatattgcgaaacgg
gatttatgccctgttttggatgaatcacaaggcattacactacgatcacttggtggaata
tttctagcagccctagctggcttggctttatccatgattgttttggccgtggaagtttgg
aaacaaaaacagcaaagagatcgacaagagattacgaaaccgcaaaagggtaattcaaag
gatgatattatgaaagttggaactagaaaaatacgtgtgaccccaatgagcactccactg
gatactatatcaaataatgagactcgtagccgaagaaaatctcgatcaaactatcctttt
aataattattattaa
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