Lepeophtheirus salmonis (salmon louse): 121130854
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Entry
121130854 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K03066
26S proteasome regulatory subunit T6
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121130854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lsm03051
]
121130854
Proteasome [BR:
lsm03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121130854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_22
AAA_5
AAA_2
AAA_lid_PRS2_C
RuvB_N
nSTAND3
TIP49
AAA_14
Prot_ATP_ID_OB_C
DUF815
IstB_IS21
Mg_chelatase
AAA_28
RNA_helicase
AAA_7
ATPase
NPHP3_N
PhoH
TsaE
AAA_17
Parvo_NS1
AAA_18
AAA_33
AAA_24
Sigma54_activat
NACHT
AAA_25
AAA_3
ABC_tran_CTD
SlyX
NTPase_1
TolA_bind_tri
DUF16
Motif
Other DBs
NCBI-GeneID:
121130854
NCBI-ProteinID:
XP_040582444
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MLFNYYADKTSLTKKRLESLQPILKKQQQLLVELTTKISKLEEEIPAINESPSTIGTFIK
SMGKNSLLVEEQRHGKIVINLENKKKSKNILSRKTQLTPNTISISNLKKGDRLALRNDTY
SAHKLLPQDIDPMVSLMVVENINVSYSEVGGLEEQIKEIREVIELPLRRPELFETLGIKP
PKGVLLYGPPGTGKTLLAKAVASQSGCKFLKVSGSELVQKYIGEGSRLIREIFSVARRTA
PCVVFIDEVDAIGAVRTESAGGENEVQRTMLELLSQLDGFTENLNVKVIMATNRIDILDP
ALLRPGRLDRKIELPNPSPKSIEKIFTIHSKKMNCGRNVDIKKICKLMKDSSGADIKGIC
TEAGMNAIRENRSYVVMNDFENAVSKVMKKFKSKNIQSVK
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcttttcaactactacgcagataaaacttcccttacaaaaaaaagacttgaaagtctt
caaccaattctcaaaaaacaacagcaacttttggtagaattaactacaaaaataagcaaa
ttagaagaagaaattcctgcaattaacgaatcaccctccaccattggaacttttattaaa
agcatgggaaagaattctcttctcgttgaggagcagagacacggaaaaatcgtaataaat
ttggaaaacaaaaagaaatctaaaaatattttatcgagaaagactcaattaactccaaat
accatttctattagtaatctaaaaaagggggacagacttgctctcagaaatgacacttat
tctgctcataaattacttcctcaggatattgatccaatggtttctttgatggtagtagaa
aatataaacgtttcctattctgaagtcggaggattggaggagcagataaaggaaatcaga
gaagttatagaacttccccttagaagacctgaactgttcgaaactcttggaattaaacca
ccaaagggagttctactatacggtcctccaggaaccggaaaaactttactggcaaaagct
gttgcgagccaatcgggttgtaaatttctaaaggtttctggcagtgaattagtccaaaaa
tacatcggagaaggaagcagactcattagagaaatattctctgttgcaagaagaacagct
ccatgtgttgtatttatagatgaggttgatgcgataggagcagttagaactgaatctgca
ggaggtgagaatgaagttcagagaacaatgctcgaacttttaagtcaattggacgggttt
actgaaaatttgaatgttaaggttattatggccacaaatagaattgacattcttgatcct
gctcttctaagaccgggaagactggacagaaagatcgaattaccaaatccttcgccaaaa
agcatagagaaaatttttacgatacattcaaaaaaaatgaactgtggaagaaatgttgat
attaaaaaaatttgtaaactaatgaaagattcttcaggtgcagatataaaaggtatttgt
acagaagcaggaatgaatgctattagagaaaataggtcttacgttgtaatgaatgatttt
gagaatgcagtttctaaggttatgaaaaagtttaaatcaaaaaatattcaatcagtaaaa
taa
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