KEGG   Lepeophtheirus salmonis (salmon louse): 121130941
Entry
121130941         CDS       T08214                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7-like
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
lsm  Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03020  RNA polymerase
lsm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lsm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121130941
  09124 Replication and repair
   03420 Nucleotide excision repair
    121130941
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsm03021]
    121130941
   03019 Messenger RNA biogenesis [BR:lsm03019]
    121130941
   03400 DNA repair and recombination proteins [BR:lsm03400]
    121130941
Transcription machinery [BR:lsm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     121130941
Messenger RNA biogenesis [BR:lsm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     121130941
DNA repair and recombination proteins [BR:lsm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      121130941
SSDB
Motif
Pfam: SHS2_Rpb7-N DUF3147
Other DBs
NCBI-GeneID: 121130941
NCBI-ProteinID: XP_040582499
LinkDB
Position
Unknown
AA seq 152 aa
MFFLKTLTHSLSILPPTYNETLKTSILGTLHTEVENKCFENIGFVIRVKRILKIKQMGVT
ELGVATFAVRYTALVLNVTAKSVINIQAMEVNSMGVFGSIGQLVSVFISKMQLKESVTST
NMNYNNNDISNNDSYSTINSYGTDIVRGDCVR
NT seq 456 nt   +upstreamnt  +downstreamnt
atgttcttcttaaaaaccctaacacactctctatcgattcttcctccaacctataacgaa
actcttaaaacttcaattttaggaacattacacacagaagtagagaacaaatgttttgaa
aacattggttttgtgattcgtgtaaagagaatcctcaaaataaagcaaatgggagtaaca
gagttgggagttgcaacatttgcagttagatatacagcattggtacttaatgttacagca
aaatcagtaataaatatacaagcaatggaggttaatagtatgggcgtgtttggtagtatt
ggccaactagtctctgtctttataagtaaaatgcaacttaaggagagtgttacatcaaca
aatatgaattataacaataatgatattagtaataatgacagttatagtactataaatagt
tatggtacagatatagttagaggtgattgtgtgaga

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