Lepeophtheirus salmonis (salmon louse): 121131160
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Entry
121131160 CDS
T08214
Symbol
Spf45
Name
(RefSeq) uncharacterized protein Spf45
KO
K12840
splicing factor 45
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121131160 (Spf45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsm03041
]
121131160 (Spf45)
Spliceosome [BR:
lsm03041
]
Complex A
U2 snRNP components
U2 related factors
121131160 (Spf45)
Complex B
121131160 (Spf45)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
Spore_YpjB
Motif
Other DBs
NCBI-GeneID:
121131160
NCBI-ProteinID:
XP_040582626
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Position
1:44554219..44556306
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AA seq
436 aa
AA seq
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MSLYDDEEVGLTDAGEAVGWSRGIQRPAPPIVTHTPPPILKAAKPLKPIIVPIVASTVLT
PATTSTASTPIPKRSNTLAPVINLQSNRQSYKAQVESTYTYNTDKSSRTDRTLIPLTDPN
WTPSNEYDPLWPNDYEKVVADIRDMKRQTQEEIAETKKRRYTENSRERARERFNQTLSPS
SSGFSRRRHSDDEEDEERRGSRRRRERRSNTGSSSAGGGAAIAPPPSLTETSNPSEFVPP
GGSMTDKGGGMAGLDVAAKIMAKYGYKQGQGLGRDEQGMSMALSVEKTSKRGGRIVHEKD
LKQQPPEDTSPNTLQGSFSEECGGGGGKPSITDMMKNPSKVVLCKNMVGPGEVDEFLEPE
VKEECNEKYGDVVRVFIYEVSNASSEEDAVRIFIEFKRVESAIKAVVDLNGRFFGGREVQ
ANFYDFHKFNNQKLDE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtccctctacgacgatgaagaggttggattaacggatgcaggagaggcagtgggatgg
tcaagaggcattcaacgtcctgctccgcccattgtgactcatactccacctccgatctta
aaggcagccaagccactcaaacccataatagtgcccatagtagcttccactgttttaact
cctgctactactagcactgctagtactcctatccctaagaggtccaacactctggctcct
gtcatcaatctccaatccaatcgacagtcctataaggcccaagtggagtccacatacacc
tacaacacagacaaatcgagtcgaactgacaggactctcattcctctcacagatcccaat
tggacccctagcaacgaatatgatcctctttggcctaatgattatgaaaaagtcgttgcg
gatattcgagacatgaagcgacaaacgcaagaagagattgcagaaacaaagaaacgacgt
tatacagaaaactctagggaaagagcacgagagcgatttaaccaaactctaagtccttct
tctagtggcttctctcgaaggagacactctgatgatgaagaggatgaagagcgccgaggc
agtcgacgaagaagagaacggaggtccaatactggctcatccagcgcgggtggaggagcc
gctattgctccccctccttctcttacagaaacttccaatccatctgaatttgttcctcct
ggagggagtatgacagataaaggcggaggaatggctggacttgatgttgcagcaaaaatc
atggcgaaatacggttacaagcaaggtcaaggacttggaagagatgagcaaggaatgtcc
atggctctatctgttgagaaaacatcaaagagagggggaagaatcgttcacgaaaaggat
ttaaagcaacaaccacctgaggatacttcgccaaatacacttcagggaagtttttccgaa
gaatgtggaggaggaggaggaaagccctcaattacggatatgatgaaaaatccatctaaa
gtggttttgtgcaagaatatggtgggacccggagaagtagacgagttcttagagccggag
gtaaaggaggaatgtaacgaaaagtatggtgatgtggttagggttttcatttatgaagta
tctaatgcctcatccgaggaagacgcagttcgtatcttcattgagttcaaacgggttgag
tctgccataaaggccgtggttgatcttaatggtagattttttggaggaagagaggtccaa
gccaatttttatgactttcacaagttcaataatcaaaaattagacgaataa
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