KEGG   Lepeophtheirus salmonis (salmon louse): 121131418
Entry
121131418         CDS       T08214                                 
Name
(RefSeq) LOW QUALITY PROTEIN: negative elongation factor D-like
  KO
K15181  negative elongation factor C/D
Organism
lsm  Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lsm00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121131418
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsm03021]
    121131418
Transcription machinery [BR:lsm03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     121131418
SSDB
Motif
Pfam: TH1
Other DBs
NCBI-GeneID: 121131418
NCBI-ProteinID: XP_040582798
LinkDB
Position
Unknown
AA seq 575 aa
MENEDYFRKDKCSGNEEDVNILSDCLIRFGSSDFIMEPEIFSQLKKYFQSGGNPEQVIEL
LSRNYVAVAQMANLMAEWLILAGAEISEVQQRVENHLHDTILKTFDPKKXDAIFAEEGEE
TPSWLAELIEYPTWRSLIYRLAEDYPDCLMLNFTIKLISDAGFQGEITSISTAAQQIEVF
SRILKTSVITFLLSSADDVQRRRNMEECAKMVCHGQHTYVYAQVLLSVLAHEPKGGHVIQ
RLQEEIQTQAQXANHDVTPITLSLLSGFQHSRAGQALGSMLSKQTLNPADIVVLYKLYNQ
LDPPPVSLIRIPQFLQLLIDALFRPGSRINQEHKSKYIYLLAYASSVTDNWSHRRGTRKG
LNKDELKGTMQAAERVHNIVSSSKGATELISEIGTLYQCIRFPVASVGVIRWVECVVSES
NFFSRSTDYCPVHLALLDEVVTCHPLLHYKVLQLFIILFEAHYDSLEILAQLEIKKMLLD
RLVNLLSRGYVLPVVKYISRCWSNTGTDISLIRYFVTEVLDTIAPPYSAEFVKHFFPLVD
NDDITGSMRREGEDLVSEFIIFCRSHFSLTLKLLI
NT seq 1728 nt   +upstreamnt  +downstreamnt
atggaaaatgaggattattttcgaaaggataagtgttcggggaatgaggaagatgtgaat
atattatcggactgccttatccgatttggtagttctgactttattatggagccggaaata
ttttctcagctaaagaaatactttcagtccggtgggaatcccgagcaagtgattgaactg
ttgtcccggaactatgtggctgtggcacaaatggcaaatctgatggctgagtggttaatc
ctagctggtgcagagatctctgaggtacaacaaagggttgagaatcatctccatgatact
atactcaagacatttgatcctaaaaagncggatgccatcttcgctgaagaaggagaagag
actccctcttggttggccgagctcatcgaataccccacttggcgttcccttatttatcgc
ctcgctgaagactaccctgattgcttaatgctcaactttaccattaagctaatatcagac
gcaggatttcaaggtgaaatcacgtctatttcgacggcagcccagcagattgaagtattt
agtcgaatactcaaaacatcggtcatcacatttttgctcagctcagctgacgacgtacaa
aggcgtagaaatatggaagaatgtgcaaaaatggtatgtcatggccaacacacatatgtt
tatgcacaagtgctcttatctgtccttgcacatgaaccaaagggtggtcatgtcatccag
cgtctacaggaggaaatacagactcaagctcaanaagcaaatcatgacgtgacacccatt
accttatctcttctctctggcttccaacactcgagagcgggacaggctttaggatccatg
cttagcaaacaaacccttaaccctgcagatattgttgtcttatacaagctatataatcag
cttgatcctccccctgtctcattgattcgtattcctcagtttttacaattattaatagat
gcactttttagaccaggatctagaatcaatcaagaacacaagtcaaagtatatatatcta
ttggcgtacgcatcatctgttacggataattggagccatcgacgagggaccaggaaaggt
ttaaataaggatgaattgaaagggaccatgcaggctgctgagagagtgcataacattgta
tctagctcaaaaggagcaacggaactgatttcagaaatagggactctttatcaatgcata
aggttcccggtagcttctgtgggagtgatacggtgggtggagtgtgttgttagtgaatcc
aatttcttctcccgttctactgactattgtcctgtacatttagctctgctcgacgaagtt
gtcacatgtcatcctcttcttcattacaaagtcttacagttatttattattctgtttgag
gctcactacgattcacttgagatacttgctcaacttgaaattaagaaaatgctcctcgac
aggttagtcaatctgttatctaggggatatgttcttcccgtggttaagtatatttctcga
tgttggtctaacacaggcacagacatttcacttattagatacttcgttacagaagtatta
gatacaatagctccaccttacagtgcagaatttgttaaacattttttccctctggttgac
aatgatgacattactggatctatgagacgcgaaggtgaagacttagtttctgagttcatt
atcttctgccgtagtcatttcagtttaacattgaaattgttaatatga

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