Lepeophtheirus salmonis (salmon louse): 121131474
Help
Entry
121131474 CDS
T08214
Symbol
Mat89Ba
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121131474 (Mat89Ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsm03009
]
121131474 (Mat89Ba)
Ribosome biogenesis [BR:
lsm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
121131474 (Mat89Ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D3
Nrap_D6
HTH_26
Motif
Other DBs
NCBI-GeneID:
121131474
NCBI-ProteinID:
XP_040582839
LinkDB
All DBs
Position
1:complement(44684897..44687369)
Genome browser
AA seq
625 aa
AA seq
DB search
MDEEVNKRKVAGNLFQILSSDYLIRLNILNKNPKSEAERIISILDKGLSGRAKKCLEIWS
SKQDIYIGFKVVDQVTTNNIVLGPYAELEAESKEFRDFWGSNCKIRRFLDGTIKETIEIE
NRSGPSYLILAIIEHLQSVHFAKVSMSASFFNLSPFIPSIYQTNDSLKEVRSTFTSLSRL
LQDEASTDSLPIRKIRCVSSSLHFGGDLSRFNVPKNIQNAERKTIKMSNNMIANYFDLES
MSTDIPKTIECIPIKLDITNKRHLSSELFSKLSLAYLIDLQRKLLKREKSIKSIIKGPEL
ILAYNGFMWRIGVEEPTKAKNQSEGDMRSSIYEFFYNMSLRHNCWSSTVWAVRKWISSRF
LDGAIPDVSLDIILSHIFLNPIGLLQAPASVESAFLRFLDYLSFTDFRTTPMILNYENCL
SKEKLGIFDKNFTLERERLPPLCSFTLFDDQHFSLYTSKVNQKDLIRLTNYARQTLHSFL
INDFVDLSSYERVCDKIDTSSYDILIHIDIYIPVAGSVKNEKQNSKHELIIPIVDFDPIQ
CYIGSLQASYGDIARFYFSKSYPHLIGVKLNKECLYKVSKSMMRPHGKRLKTENELVPNV
DAMLDDLRIMGRGIVKEIDLVNVSI
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggaagtgaacaagagaaaagttgctgggaatctctttcaaatcctttcttca
gattatctcattcgtttaaacatcttgaataaaaatcccaagtctgaggccgagcgaatt
atttctatactcgataaagggttaagtggacgtgctaagaaatgtctggagatatggagc
tccaagcaggatatttacattggattcaaagtcgtggatcaagtcactacgaataatatc
gtcttgggaccctatgctgagttggaagcagagtcaaaagaatttcgcgatttttggggg
tctaattgtaagattcgtaggttcttggatggaacaattaaggagactattgaaattgaa
aatcgctcaggaccctcatatttaatattagcgataattgagcatttacaaagcgtacat
ttcgcgaaagtatctatgtcagcgtccttctttaatctctcgccctttataccttctata
tatcaaacaaacgattctcttaaagaagtacgctctaccttcacgtctttaagtcgtctg
ttacaagatgaagcttcgacagactcacttcctattcgtaaaatacggtgcgtttcatca
tctctacattttggtggggacttgagcagattcaatgtccctaaaaatattcaaaatgct
gaacgaaaaaccataaaaatgtcaaacaatatgatagcaaattactttgatttagaatca
atgtccacagatattccaaaaactatagaatgtattcctatcaaattagacattacgaat
aaaagacatttgagttcagaattgttctctaaactcagccttgcatatttaattgatttg
caaagaaaactgctgaaaagagaaaaatccattaaatctatcattaaaggccctgagttg
atccttgcctacaatggatttatgtggaggattggtgttgaggagcccactaaggctaaa
aaccaatcagagggtgatatgaggagttcaatttatgagtttttttacaatatgagctta
cgacataactgctggtcatcaactgtttgggccgtaaggaaatggatatctagccgattt
ctggatggagctattccagatgtttcccttgatataattttatcacatatttttctaaac
ccgataggattgttgcaagctcctgcatctgttgaatctgcatttcttcgctttcttgac
tatttatcttttacggactttcgaacaacgcctatgatactcaactatgaaaattgtttg
tcaaaagaaaaattaggaatatttgataagaacttcactttggaacgtgagcggctacct
ccattatgctcctttacactctttgatgatcaacacttttctttatatacatctaaggtc
aatcaaaaagatttgatacgactcacgaactatgctcgacaaactttgcactccttcctc
attaatgactttgtagatttatcgtcatatgaacgtgtttgcgataagattgacacttca
tcctatgacatacttatacatattgatatatatattccagtagcaggttctgtaaagaat
gaaaaacaaaattcaaagcatgagttaatcatacctatcgtagactttgatccaatccaa
tgttatattggttctcttcaagcttcctatggagacattgctcgattttacttttcaaaa
tcttatcctcatcttataggtgttaaattgaataaggaatgtttatataaagtttctaag
tccatgatgagacctcatggtaaaaggcttaagacggagaatgagcttgttcccaatgtc
gatgccatgttggatgatttaaggattatggggagaggaatcgtaaaagaaatcgactta
gtcaatgtatctatatag
DBGET
integrated database retrieval system
