Lepeophtheirus salmonis (salmon louse): 121131837
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Entry
121131837 CDS
T08214
Name
(RefSeq) UV-stimulated scaffold protein A-like
KO
K23720
UV-stimulated scaffold protein A
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
121131837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121131837
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
121131837
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
Motif
Other DBs
NCBI-GeneID:
121131837
NCBI-ProteinID:
XP_040583169
LinkDB
All DBs
Position
1:complement(100706..103242)
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AA seq
428 aa
AA seq
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MEMSDKSLQGFIRELTATDDNELDSGKLKKLKYICKSYPERIPHVSDFIIKRMSRSTHCQ
IRLLCFKVLDHLFRRSSVVRSIVVSKLKIIISLTFGLSSDKPLPPPDTTRKILIKLARRT
FGEWTTEFKDKYPKLESTSIYLKEHCNCDVYYERRESHESSLKMTRLWRDHCRNVVNEMN
DKKSYIEEVCIQLQNAIDLIIPSSFVADEEDGDKIIIQDDEDFMRDNGVINLNKSVAVVD
LSIPSFINQENEVLVDLIIEQTKVLRNRLIPLVIKWTTIFEKSEQYVSEFTHQRGIAENV
RSKLVKLEDICTRLIIPKKRITNIDSDDDDDEFEEVPEKEGYEESYQEPSSSSKIEPWKD
IQLLKKLEAATGQKLIFDKQRKKRKLTPLSVDKSRKRLEKIVFNRSSLKRVREDIKSNLI
NSSKRVIL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgtcagacaaatcactccaaggatttatccgagagttaactgctactgatgat
aatgaattggattctgggaaactaaaaaaactaaaatatatttgcaagtcttatccagag
cgtattccgcatgtaagtgactttatcataaagcgtatgagtcgttctactcactgccag
atccgcttattatgtttcaaagtattagaccatttatttcgtcgaagctctgttgtacgt
tcgattgtagtttcaaagctcaaaataatcatatccttgacctttggtctgtcttctgat
aagcctttacctcctccagacactactagaaaaattctcataaaactagctcgtcgaaca
tttggtgaatggactacggaattcaaggacaaatatcctaaattagaatccacttccatc
tacctcaaagagcattgcaactgtgatgtgtattatgagaggagagaaagtcacgaatcg
tccttaaaaatgactcgtctttggcgggatcattgtcgtaatgttgtgaatgaaatgaat
gataaaaaatcttacattgaagaagtttgtattcagcttcaaaatgctatagatctcatt
atcccttcatcgtttgttgcggatgaggaggacggagataaaattatcattcaggatgat
gaagactttatgcgtgacaacggagttatcaacttaaataagagtgtggccgttgttgat
ctttcgattccttcttttattaatcaagaaaatgaagttcttgtggatttaatcattgaa
caaacgaaagtattgaggaatcgattgatcccattggttattaagtggaccactatattc
gaaaagtctgagcaatacgtgtcagaattcactcatcaaagaggaatagcggaaaacgtt
cgaagtaagcttgtaaagttagaagatatttgtactcgtttaattataccgaaaaagagg
attacgaatattgatagtgacgacgatgacgacgaattcgaagaggttcccgaaaaagaa
ggatatgaagagtcatatcaggagccttcctcctcctctaagatcgagccatggaaagat
atacaacttttaaagaaactagaagcagccactggccaaaagcttatatttgataagcaa
cgaaagaaaaggaagttgactcctttgtcagtggataagagtcgcaaacgtttagaaaag
atagtttttaaccgttcctcactgaaacgcgttagagaggatattaagtcgaatttaatt
aattcttcaaaaagagttattttataa
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