Lepeophtheirus salmonis (salmon louse): 121131891
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Entry
121131891 CDS
T08214
Symbol
alpha-Spec
Name
(RefSeq) spectrin alpha chain
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121131891 (alpha-Spec)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsm04812
]
121131891 (alpha-Spec)
Cytoskeleton proteins [BR:
lsm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121131891 (alpha-Spec)
Intermediate filaments
Intermediate filament-binding proteins
121131891 (alpha-Spec)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_8
SH3_2
EF-hand_6
SH3_3
EF-hand_5
SH3_10
Spectrin_SYNE1
Motif
Other DBs
NCBI-GeneID:
121131891
NCBI-ProteinID:
XP_040583224
LinkDB
All DBs
Position
1:48952108..48963523
Genome browser
AA seq
2417 aa
AA seq
DB search
MEQPVPVKEVKILETAEDIQERREQVLRRYVEFKDAARVKREKLEDSRRFQYFRRDAEEL
ESWIYEKLQAASDENYKDPTNLQAKIQKHQAFEAEVAAHSNAIVTLDNAGMEMITQDHFQ
SMEIREKLDELHRLWDLLLSKLAEKGMRLQQALVLVQFLRQSDEVMFWITDKEAFVTADE
YGHDLEHVEVLQRKFEEFQKDMASQEYRVSEVGDTADKLVGDEHPESETVIKKKEEVQAA
WARLKKLANGRKEKLFGAHEIQRFNRDADETIAWITEKDAVLSSDDYGKGLASVQALQRK
HEGVERDLAALEDKVLTLGQEADRLCQIHPEHAEQIKAKHQEISKNWEQLLDKAKDRRQK
LDESYHLHRFLADYKDLTSWINDMQAVIEADELAKDVNGAEALLESHAEHKSEIDVREDS
FRATAEAGQMLLNSGHSASDEVQEKLINLANEKNKLLELWEERRVLYEQCMDLQLFYRDT
EQTDTWMGKQEAFLTNKDLGDSLDSVEAMIKKHEDFEKSLAAQEEKIKALDEFATKLIKG
QHYAADEVAQKRALLLERRALLLEKSAQRKAMLHDSLCFQQFDRDADETKGWINEKLKVA
TDDSYLDPTNLNGKVQKHQNFEVELNANKSRFEDLINTGEKLIESDHVMSSQIKAKLEEV
TNLWEGLCNSTNKKSIKLEEASQQQTYNRGIEDLELWLSEVEGQLGSEDYGKDLTSVQNL
QKKHALLEADVSSHQDRVDGVRIASDQFAKSGHFDADNIVVKQEKLLQRYQSLKNPLGDK
KQRLTDSIAVQQLFRDVEDEEAWIREKEPIIASTNRGRDLIGVQNLIKKHQAMQAEINNH
EPRIDTVSQTAQRMVEEGHFASDEIKTRLGLLHDHWNQLKDKAAQRKQDLEDSLQAHQYF
ADANEAESWMKEKEPLAGNEEYGRDEDGSEALLKRHEAFMSDLEAFGNTIQDLKEQAANC
RQQETPIMDITGKECVMALYDYTEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFV
PAAYVKKIDPGLTASQQQLVDNSSVSSRQAQIEKLYGNLLNLGRERAKRLSETCKAYQLV
REAAELTNWIKTKEQHAQIQNVGDDLEQVEVMQKKFDDFQSDLKANEVRLAEMNEIAMQL
VTLGQTDAAIKIQAQLEDLNKKWSDLQSVTTERVAAFERAHEVQRFHRDVEETKDWIQEK
DEALSIDDLGKDLRSVQALQRKHEGLERDLAALGDKIRRLDEGATKLMTTHSESAEVIQE
KKKEIYEEWTQLIAKAGKRKDKLLDSYDLQRFLSDYRDLMSWINSMKSLIANDELASDVT
GAEALLERHQEHRTEIDARSGTFQAFELFGQQLLHGSNYASIEVQEKLESMSAAREDLEK
AWIARRMQLDECLELQLFYRDCEQAENWMQSRETFLASDEVDNEGDNVEALIKKHEDFDK
AIGNQEEKIESLSTYADQLIASDHYAKGDVGDKKKEVLSRWEELKEALIEKRSKLGESQT
LQQFSRDADEIENWMLEKLQLAEEENYKDPANIQSKHQKHQAFEAELGANSDRIQSVLSM
GQNLIDRRKCAGSEDAVQNRLRSISEQWEILTQKTCEKSMKLKEANRQRTFIAAVKDLDF
WLGEVESLLNTDDSGKDLASVQNLMKKHQLVEADILAHEDRIKDMNEQADSLISSGQFEA
KEIQDKRSSINDRYKHILDLAAHRQSLLNEASTLHQFFRDIADEESWIKEKKLLVSSDDY
GRDLIGVQNLKKKHKRFESELASHEPTIKSVQDAGETLIGVSQMGETEIKQRLRQLNDLW
EELKEMASTRGRKLDESITYQNFLAKIEEEEAWISEKQQLLTVPDLGENMAAVQGLLKKH
DAFQTDLSVHLDSCKEVSADGQKLIEKENHHAESIASRCEQLRNKMHNLGDLSNVRKQNL
LDNSAYLQFMWRADVVESWIVDKEAYVRSEEFGRDLSSVQTLLTKQETFDIGLEAFENEG
IENITALKNKLVSSGHNKSDAINKKYEEVSSRWKNLLEESNNRRMKLREVQEQFRQIEEL
YLMFAKKASSFNSWFENAEEDMTDPVRCNSIEEIKSLREAHNQFQESLTSANADFEALSQ
LDEQIQSFNVGPNPYTWFVMPALQDTWKNLQKIIKERDLELAREYQRQEDNDKLRKEYAL
LANAFHTWLTDTRTSMMEGSGTLEEQLATIGLKAHEVASRNTDLKKIEDLGAILEEHLIL
DNRYTEHSTVGLAQQWDQLNQLGMRIRHNLEQQIQARNQSGVSEDALKEFSMMFRHFDKD
KSGRLNHNEFKSCLRALGYDLPMVEEGGPDEEFDAILDVVDPHRDGFVSLQEYMGLMISK
ETENVQSSEEIENAFRAITQQQERDYVTKEELYANLTKEMADYCMRKMKLYVDPRTGNVV
NDAYDYMEFTRTLFSNS
NT seq
7254 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcctgttccagttaaggaagtcaagatccttgaaacggcggaggatattcaa
gagcgccgtgaacaagttttacgacgatatgttgagtttaaagatgctgcccgtgtcaaa
cgtgagaaattagaagattctcgtcgatttcaatactttaggagagatgctgaagaatta
gaatcatggatttatgaaaagttacaagcagcttctgatgaaaactataaggacccaact
aatcttcaagctaaaattcaaaaacatcaagcatttgaggctgaagttgcagcacattcc
aatgcgattgttactcttgataatgctggcatggaaatgatcactcaagatcattttcaa
agtatggagattcgggaaaagttagatgagctacatagactatgggatctgttgttaagc
aaattagcagaaaagggtatgagacttcaacaagcactcgtgttagttcaatttttgaga
caaagtgatgaggtaatgttttggattactgacaaagaagcatttgtaactgctgatgaa
tatggacatgaccttgaacatgtagaggtacttcagaggaaatttgaagaatttcagaag
gacatggcatctcaagaatatagagtttctgaagtaggagatactgcagataaattagtg
ggtgatgagcaccctgaatcagaaactgttattaaaaagaaggaagaagttcaagcagca
tgggctagacttaagaaattggctaacggtcgtaaagaaaaactctttggagcccatgaa
atacaaagattcaatagagatgcagatgaaacaattgcctggattacagaaaaagatgca
gttttatcatctgatgactatggaaaaggtctggccagtgtccaagcccttcagcgtaaa
catgaaggtgtggaaagagacttagctgctctcgaagataaagtcctaacgttgggccag
gaagctgatcgtctttgtcagatacatcctgagcacgcagaacaaatcaaagcaaaacat
caagaaataagtaaaaactgggagcagttgttggataaagcaaaagacaggagacaaaag
ttggatgaatcttatcatcttcatcgatttcttgctgactacaaggatcttacgtcctgg
atcaatgacatgcaggctgtaattgaggcagatgaattagccaaagacgttaatggtgcg
gaagctcttttggaaagccatgctgagcacaagtctgaaattgacgttcgagaggactca
tttagggctactgctgaagctggtcagatgcttttaaatagcggacattctgcctctgat
gaagttcaagaaaaattaataaatcttgccaatgaaaaaaataaacttctcgaactctgg
gaggaaagacgtgttctttatgagcaatgtatggatttacaattgttctatagagatacc
gagcaaacagatacgtggatgggaaagcaagaggcctttttaactaacaaggatttggga
gactccctcgattctgttgaagctatgattaagaagcatgaagatttcgaaaaatctttg
gcagctcaagaggaaaagatcaaagctcttgatgagtttgccaccaaacttattaaaggg
caacactatgctgctgatgaggtggctcaaaaaagggctcttttactggagagaagagca
ctgcttttagagaaatccgctcagcgtaaagctatgcttcatgactctttgtgtttccag
caatttgatagagatgctgatgaaactaaaggctggataaacgaaaagcttaaggtagcc
actgatgattcttatctcgatcctacaaacctcaatggcaaagtacaaaagcaccaaaat
tttgaagttgaattaaatgccaataaatctcgttttgaagatcttattaatacaggtgaa
aaattaattgagtctgatcatgttatgtcatcgcaaattaaggctaaattagaagaggta
actaatctttgggaaggtctatgtaattccacaaataaaaaaagcattaaattagaagaa
gcatctcaacaacaaacatataatagaggtattgaagatttagaactttggttaagtgaa
gtggaaggacaacttggatcagaagattatggtaaagatcttacgtctgttcaaaacctt
caaaagaagcatgcccttttggaagctgatgtttcctctcatcaggatcgtgtagatgga
gttcgtattgcctccgatcagtttgccaaatctggtcattttgatgctgataatattgtt
gtaaagcaagaaaagcttctacaacggtatcaaagtcttaaaaatcctcttggagataaa
aaacaaagactaacggattctattgcagtccaacaactatttagagatgttgaagatgaa
gaggcctggataagggaaaaagaacctatcattgcatctactaatcgaggaagagacctt
atcggtgttcagaatcttatcaagaagcaccaggcaatgcaagctgaaatcaataatcat
gaaccaagaattgatactgtgtctcagaccgcacagagaatggtcgaagaaggtcatttt
gcatcagatgaaatcaagacccgtctgggacttcttcatgatcattggaatcaattaaaa
gacaaagcagcacagcgcaagcaagatttagaagattctcttcaagctcatcaatatttt
gccgacgcaaatgaagctgaatcatggatgaaagaaaaagaaccactagctggtaatgaa
gaatatgggagggatgaagatggctctgaagcattgcttaaacgtcatgaagctttcatg
agtgatttggaggcttttggcaatacaattcaagacctaaaggaacaagcagctaattgt
cgtcaacaagaaacacctattatggacattactggtaaagaatgcgtcatggctctctac
gactatactgaaaagtctccaagagaggtgtcaatgaaaaagggtgatgtattaacctta
cttaactcaaacaacaaagattggtggaaggtcgaagtcaatgatcgacaaggatttgtt
ccggccgcatatgtcaagaaaattgatcctggtctaactgcatctcaacaacaacttgtt
gataatagttccgtgagttcaaggcaagctcaaattgaaaagctttacggtaatttgctg
aatcttggacgtgagcgtgcaaaacgcttaagtgaaacttgtaaagcctatcaacttgtt
cgagaagccgctgaattgactaattggataaagaccaaagaacaacatgctcaaatacaa
aatgtgggcgacgatcttgaacaggttgaggttatgcaaaagaaatttgatgactttcaa
tcagatttgaaggctaatgaggttagattagctgaaatgaatgaaattgctatgcaatta
gtgactctaggacaaactgatgctgctattaagatccaagctcaattggaagacttaaac
aagaaatggtcagatctccaatctgtgaccactgaaagagttgcagcttttgaaagagct
cacgaagtacagcgcttccatagagatgttgaagaaaccaaagattggatccaagaaaag
gatgaagcactcagtattgatgatctcggaaaagacttaagatcagttcaagcattgcag
agaaagcatgagggccttgagagagatttggctgctttgggggataaaattcgacgatta
gacgaaggtgctactaaattgatgactactcatagcgaatctgccgaagtcattcaagaa
aagaagaaggaaatctatgaagaatggacacaattgattgctaaagctggaaagaggaag
gataaacttcttgactcttacgacttacagaggtttttgtccgactacagagatctcatg
tcgtggataaattcaatgaagagtctaattgccaatgatgagcttgctagtgatgttact
ggtgctgaagctctattggaacgtcatcaagagcatagaacagaaattgacgctcgtagt
ggaactttccaggcatttgaattgtttggacaacaattattgcatggtagcaactatgcc
tctattgaagtgcaagaaaaacttgagtccatgagtgcagctagagaagacttggaaaag
gcctggattgctcgtcgtatgcagcttgatgaatgtttggaattgcaattgttctacaga
gattgtgaacaagcagagaactggatgcaatctcgagaaacgtttttggcatctgatgaa
gttgataacgaaggagataatgtagaagctttaattaaaaaacatgaagattttgacaaa
gctattgggaatcaagaagaaaaaattgaatccttatctacttatgctgatcaactgata
gcttctgatcactatgcaaaaggggacgttggagacaaaaagaaagaagtattatctcgc
tgggaggaacttaaggaagcattgattgaaaagagatccaaattaggtgaatctcaaacc
ttgcaacaattttcaagagatgctgacgaaatcgaaaattggatgttagaaaaattgcaa
ttagccgaggaagaaaattacaaggatcctgcgaatatccaatctaagcatcaaaaacat
caagcattcgaggctgagttgggagcaaattctgatagaatacagtcagtgctctccatg
ggtcaaaatttgattgaccgaaggaagtgtgctggctctgaagatgctgttcaaaatcgt
cttcgttctatttctgagcaatgggaaatcctcacacaaaagacgtgtgaaaaatccatg
aaattaaaagaggccaatcgccagcgaacatttattgctgctgttaaagatttagatttc
tggcttggtgaggtagagtccctacttaatactgatgactctggaaaagatctggcatct
gttcagaatttgatgaagaagcatcaactggttgaagctgatattctcgctcatgaggat
cgaatcaaggatatgaatgaacaagctgattcactcatttcaagtggtcaatttgaagct
aaggaaattcaagataagagatcatctattaatgaccgctataagcacatcttagacctt
gctgcacatagacagtctcttctgaatgaagccagcactcttcaccaattctttagagat
attgcagatgaagagtcctggattaaagagaagaaactattggtttcttctgatgattat
ggaagagacctcattggagtgcaaaatttgaaaaagaaacacaaacggtttgagtctgag
ctggctagtcatgagcctacaataaagtctgttcaagatgctggagaaactttgattgga
gtttctcaaatgggagaaacagaaattaaacagcgtttgagacagttgaatgatttatgg
gaggaattgaaggaaatggcttcaaccagaggaaggaaattagatgaatccattacttat
caaaatttcttggctaagattgaagaagaagaagcatggatatctgagaagcaacaactt
cttaccgtacccgatttaggtgagaacatggctgcagtacaaggtttattgaaaaagcat
gatgctttccaaacggatttatctgtccacttggatagctgtaaagaagtttctgctgat
ggtcaaaaattgattgaaaaagaaaatcatcatgctgaatccattgcttctcggtgtgaa
caactgcgtaacaaaatgcacaaccttggagatctatccaatgttaggaagcaaaatcta
ttggataactcagcttatcttcaatttatgtggagagctgatgtagtagagtcttggatt
gttgataaggaagcttatgttcgttctgaagagttcggacgtgacttatctagtgttcaa
acgttacttactaaacaagagacttttgatattgggcttgaagcatttgaaaatgaggga
atcgaaaacattactgccttaaagaacaaactcgtgtcttcaggtcacaacaagtctgat
gctatcaataagaaatatgaggaagtaagtagtagatggaaaaatctattggaagaatca
aataaccgtagaatgaaactccgtgaagttcaagaacaatttagacagattgaagaactc
tatctcatgtttgctaaaaaggcatcttcttttaattcctggtttgagaacgctgaagag
gacatgacggatcctgttcgttgcaattccattgaagaaatcaagtcacttagggaggct
cataaccaattccaagagtcattgacttctgccaatgctgactttgaggctttgtctcaa
cttgatgaacaaatccaaagtttcaatgttggacccaatccttatacttggtttgttatg
ccggctcttcaagatacttggaaaaatcttcaaaaaataattaaagaaagagatcttgag
ttagcaagagaatatcagcgacaggaggataatgataagcttaggaaggagtatgctctg
ttagctaatgccttccatacttggcttaccgatacgagaacctcaatgatggagggatct
ggaaccttggaagaacaacttgccaccattggcttaaaggctcatgaagttgcttcccgt
aacacagatctcaagaaaattgaggatttgggagccattttagaagaacatcttattttg
gataaccgttatactgaacattccaccgttggtcttgctcaacagtgggatcagttgaac
caactaggtatgcggattagacataatctggaacaacaaattcaagctcgaaaccaatct
ggagtatctgaagatgctcttaaagaattctccatgatgttccgtcacttcgacaaggac
aaaagtggccgactcaatcacaatgaattcaagtcctgccttcgtgccttgggttatgac
cttcctatggttgaggaaggagggccggatgaagagtttgatgctatccttgatgttgtt
gatccgcatcgggatggtttcgtatctttacaagaatacatgggccttatgatatcaaaa
gaaactgagaatgttcaatcctctgaggaaattgagaatgccttccgagccatcactcaa
caacaagagagggattatgtcaccaaggaagaactctacgctaatcttactaaagaaatg
gcggattactgtatgaggaaaatgaagctctacgtagatcctagaactggaaatgtagtc
aatgatgcctatgattacatggaatttacccgtactctattctctaactcctag
DBGET
integrated database retrieval system