Lepeophtheirus salmonis (salmon louse): 121131970
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Entry
121131970 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: rhomboid-related protein 2-like
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsm01002
]
121131970
Enzymes [BR:
lsm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
121131970
Peptidases and inhibitors [BR:
lsm01002
]
Serine peptidases
Family S54: Rhomboid family
121131970
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
121131970
NCBI-ProteinID:
XP_040583318
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Position
1:51234404..51236776
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AA seq
466 aa
AA seq
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MTNNYLYKLRMALEEDLESQLLPDESTKVKKQLTILIPGDEEEPGGFRQSRCYTAPIFSE
IDCKSSIRNNIPFAKRSRHISHTDPNNNQHLVKELTFGQALSRTWTFGSVVSAISTDEWK
PIFHKLDKESDGIPNGKIPMTKFKELLDEDPLWKEGVPSSVQERILQEVDRNKDGVIDFD
EFIELVKGTKLGLSAKRRRAFRELLKETVDFLVPYKYSYQNQYSCSPPPFFMITISLLQV
LIFIYGDSGIPESDGVPYCSSLIYNPYKRSQVWRYLTYMLVHSGXFHLSFNLMVQLILGI
PLEMVHGWWRVMSVYVFGVLAGSLWTSVFRPNVFLSGASGGVYSLITAHLGTVIMNYREM
AYPLFRFSIVLLITLTDIFVYIYDAYVIGQTKPISYPAHIFGAITGLLVGITVLKNLQWQ
KYEKIIWFVSGIAFLGLMLSAIAWNIYYYDDMNIIPDSLCKDRSVL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataattacctttacaaactcaggatggccctagaagaagatttggagtctcag
ttattaccagatgaaagtaccaaagtaaaaaagcagctaacaattcttattcccggagat
gaagaagaaccaggaggatttcgacagagtcgctgctatacagctccaatcttttcagaa
attgattgtaaatcctctatccgaaataatattccatttgctaagcgctctagacacatt
tcacatacggatcccaacaataatcaacatctcgttaaagaacttacctttgggcaggct
ctgagtcggacatggacttttggatccgttgtctcggctatttctactgatgaatggaag
cccatttttcataagttagataaagagtcggatgggattcctaatggaaaaataccaatg
acaaagtttaaagaattactggacgaggatcccctttggaaagaaggagttcctagctct
gtgcaggaaaggatccttcaagaagtggatcgtaataaagacggtgttatagactttgat
gagttcatagaacttgttaaaggaaccaaattaggtcttagtgccaagagacgacgagcc
tttcgtgaacttttaaaagaaacggtcgattttttagttccttacaaatactcgtatcag
aatcaatactcctgttccccgcctccttttttcatgattacgatatcccttcttcaagta
ctcatattcatctatggagattctggaatcccggagagtgatggagttccctactgttct
agcctaatttacaatccttataaacgtagtcaagtgtggagatatttaacatatatgctc
gttcattctggancttttcatctatcttttaatctcatggttcaactaattctggggatc
ccactggaaatggttcatggatggtggcgtgtgatgtcagtttatgtatttggagtactt
gccggatctctttggacaagtgtattccgacccaacgtttttttatcaggggcaagtggt
ggcgtctattctctcattactgctcatttagggactgtcataatgaattatagagaaatg
gcttatcctttattccgattctccatagtcttactcatcactctcacagatatattcgtt
tatatctatgatgcatatgtcatcggacagactaagcctataagctatcctgcgcacata
tttggagccatcactggcctcttagtcggtataaccgtccttaaaaatctacagtggcaa
aaatacgagaaaatcatttggtttgtgagcgggatcgcatttttaggacttatgttgagt
gctatagcatggaacatttactactacgatgatatgaatatcattccggattctctctgc
aaagacagaagtgttttatag
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