Lepeophtheirus salmonis (salmon louse): 121132076
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Entry
121132076 CDS
T08214
Name
(RefSeq) condensin-2 complex subunit D3 isoform X1
KO
K11491
condensin-2 complex subunit D3
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121132076
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
121132076
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
HEAT
Adaptin_N
UVSSA_N
DUF7360
Motif
Other DBs
NCBI-GeneID:
121132076
NCBI-ProteinID:
XP_040583453
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All DBs
Position
1:54752835..54766883
Genome browser
AA seq
1598 aa
AA seq
DB search
MIESPHFEDGGEDDDEGLQLIVNCLKCLYLDELPIEWVDHVWDSQFTEVNELPFSYTNRM
NYENLNHILGKTTAYITEWVKNYKERPSISTSFNDTRSYGVSSIWATLVAQNIKYKSLIA
LLYYLMHQGQNLSASEEDRDLCIESSSLYFLLLSLPGSGAFKVFHAVLYCKTLNTFKLAL
KLHLIRSSPKKKSSSQAKKKSSQQRWGGSLYSGGTNYDSDGSDDEMTELLSPDQIRVLTK
SLNSVLDNFLFYLSHSSLKRSPESLDLTIAELVDLTHLEITNPNLNFKKPRERHGLSYLA
FNAYKGLQTLCSPLHGGSAKISKMILKALLPGVLMVHKGASEVNTKGLSVIREHSILFLH
HLIDILEECSYEGVEIFIQHLAFHVPDKAEFRQKASSTIVSITRRLPRIFYNRVVRWFLS
WSYNEMMSQRLFAVEVMGAFILVEERSAISHTMKDLSPPAQENNDPQDLISHKFIFGVLL
DRCRDSSTKVRAKAFKTLSDITIEAHSDMIEIIRSTFNVDKNDGNNISSRRSNQINFIKV
LQDLSNSDLQNMNPIPSAEDIIEFLIISVSDESVFVRKSSLQVMYNIVKISNVFREELVR
ILAKHCRDPSLMVRKQMISFLTEILRIYPENEIVIHLWVEGIFPIVMDSELKASEKALEC
IWEMLFENLTDHECVNSQINVLPWQIIHESENLGMTKYLTRASGIWYRDGLLKSSIFKMI
RSHINTENNDRAWFLLAVITNHVPLQDPHFVMEYFNASIHTQQGVGLYTLIQVLSVLLSS
VSRLSIEEQKNLQKDLVLLIERFSLPTELISTATDIATVVSQLEALRKDGSIDVALYHSN
VESWACNVVDLIDKDLQTGLLNNPNDKDFRLIRQIFTLGELSLIVPGKIHKKLFLLLQNL
VFNDKKTPGAGPSNISLGGRAGSSSKIAALAIVTLNKMCVTNEEMAKKIVPAYGRLLDES
TDSAVKNNIIYGLSDLCVKYANVVESIVPQMVTCLKDKSSLVKQTTLVTIIHLLQEDYLK
IGGGRGTFFLRLIQTKLDDEIKSLTEFFIKHRLMKKSPNVMYQHFIEALFFYNEYKGHST
YNKFIDSQNIREMFSIAGASGKESRMYLYKFMLENMNDEQRFQMTYKLCQDILGGTLEGQ
IKLNDDSYGVLKDALACLASDEIKLVSLKSKSTDEVEDGDEDLAGAVAAVAKKTIISQVV
KKNIIENIIPIVIALKHKLEELKHPLIDDLMTYLREIMKDYKDEVKEMISADKRLAHEIQ
FDLKRWEDQQRRNEARDTEDDSSGEDENDGDFHPEAQRRRIGSREVNDDRLIRQVLKTAI
VNFRSRRRTLNDDIEKVDSGVVQSSRRTLTHVDLADRNKDRETVAEVPKNNSAPQLNLNK
EQEQSESLCKESYGSERDCASELESNKERPSVELSTSTNKCGEETETSKQPCIPTEKSVV
SESSKRVSKETASQSLRSSPESLSFLASTTIASSAPIGVPKLGRAEVRDSSSTGEVFLNP
QNAKKRLFNSTGNSIVTPVKRLKINRAISTPSVSVRNITFLNESDCSAISFISAPSPKNV
PNSISSKKGEEEDGSIGSFRYGRNKTDAFDHLVDGNKK
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaatcccctcattttgaagatgggggagaggatgatgatgaaggactgcaactc
attgtcaactgtttaaagtgcctttatttggacgagttgcccatcgaatgggtagaccat
gtttgggactctcaatttacggaagtaaatgagttgcctttctcgtatacgaacagaatg
aattatgaaaacttgaatcacatccttggaaagactactgcatacattacagaatgggtt
aagaattacaaagaaaggccttccatttccacaagttttaatgatacccgttcttatggc
gtgtcttccatatgggccacattagttgctcaaaacatcaaatacaaatccctcattgct
ctattgtattatttaatgcaccagggtcaaaatctgagtgcaagtgaagaagatagggat
ttgtgtatcgagtcatccagtctatactttctattattgagtctccctggaagtggagct
tttaaggtgtttcacgcagttctctactgtaaaactctaaatactttcaaactagcattg
aagcttcatttgatacgttcaagtcctaagaaaaaatctagttcacaagcgaagaaaaaa
tcatcacaacagcgatggggtggatctctctatagtggaggaacgaattacgattctgat
ggatccgatgatgaaatgacggagttactatcgccggatcaaataagggtcttgacgaaa
tcccttaattcagtacttgataattttttattttatctttctcactcttctcttaaaaga
agccccgagtccttggatctaaccatagcagaattggtggatttaactcatttggagata
actaatcccaatctgaactttaagaaacctagagaacgtcatggtctatcatatcttgcc
tttaatgcctacaaggggcttcaaactctttgctcccctcttcatggtggttctgcaaaa
atatcaaaaatgattttgaaggcacttctccctggcgtactcatggttcataaaggagct
tctgaagttaatactaaaggactctctgttatacgagagcactccatacttttccttcat
catctcattgatattctagaagagtgctcatatgaaggagtggaaatatttattcaacat
ctagcatttcatgttccggataaagcagaattccgtcaaaaagcttcctcaacaattgtt
tcaatcacacgccgtcttccaaggattttttataaccgagttgtgagatggttcctttct
tggtcttataacgaaatgatgagtcaacgtttatttgcagttgaggttatgggtgccttt
attctagtagaagaaagatccgcgatctcacatacaatgaaagatctatcaccacctgct
caagaaaataatgacccacaggacttgatatcccacaaatttattttcggtgttcttttg
gacagatgcagagatagttcaaccaaagtaagagccaaggctttcaaaacactttctgac
attacaatagaggctcacagtgacatgattgaaatcattcgctctacttttaatgtagat
aaaaatgatgggaataatatctcatcaaggagaagtaatcaaattaactttatcaaagtt
cttcaagacttatctaactctgatcttcaaaatatgaatccaatcccaagtgctgaggac
ataatagagtttcttataataagtgtatctgacgaatccgtatttgttcgcaaaagttct
ctccaagtcatgtacaatattgtcaagatttccaacgtatttcgagaagagttggtacga
attttagcaaaacattgtagggacccttctcttatggtacgaaagcaaatgatatcattc
ctaacagaaatattgagaatatatcccgagaatgaaattgttatacatctttgggttgag
ggaatttttccgatcgtaatggattccgaattaaaagcctccgagaaagctctcgaatgt
atttgggaaatgctattcgaaaatttgactgatcatgaatgcgtaaattcgcagataaac
gtattaccttggcaaatcattcatgagagtgagaatctgggaatgacaaaatatttgacc
cgtgcaagtggaatttggtatagagacggacttctgaaatcctccatattcaaaatgata
cgatcccacatcaatacggaaaacaatgatcgagcctggtttcttttagctgtaataacg
aatcatgttcctttacaagatccgcattttgtgatggaatattttaacgcatccattcat
acacaacagggggttggtctctacacattaattcaagtcttgagcgttctcctctcatct
gtgagtcgattgtccattgaagaacaaaaaaatcttcaaaaagacttggtcctcctcatt
gagcggttctcattacctacagaattaatatccacagctacagacattgccacggttgta
agtcaattagaggctcttcgtaaggatgggagtattgacgttgcattgtatcactcaaat
gtagaatcatgggcttgtaatgtagttgatttaattgacaaggatctacaaacgggttta
ttgaataatccaaatgataaggactttcgtcttattcgtcaaatatttactcttggagag
ttgtctcttattgttcctggaaaaatccacaaaaaactttttctattattgcaaaatctt
gtttttaatgacaaaaagacccctggggcaggtccttcaaatattagcttaggaggacga
gcaggctcttcctccaaaattgctgctcttgccatcgttacattgaataaaatgtgtgta
acaaatgaagaaatggcgaaaaagatcgtgcctgcctatggcagactccttgacgagtca
acggactctgctgtgaaaaataatataatctatggtctaagcgatctctgtgtaaaatat
gctaacgttgttgaatccattgttccgcaaatggtaacttgtttaaaggataagtcaagt
ttagtaaaacaaacaacccttgtcactattattcatctccttcaagaagattatctcaag
ataggtggtggccgaggtactttttttctccgacttattcagactaaattggatgatgaa
attaaatcccttacagagtttttcatcaaacataggctcatgaagaagagtcctaatgtg
atgtatcagcatttcattgaggccttgttcttctataacgagtacaaaggtcactccaca
tacaataaatttattgattcacaaaatatccgtgaaatgttctctattgcgggtgcgtct
ggaaaagagtcaagaatgtatttatataaattcatgttggaaaacatgaacgacgaacaa
agatttcaaatgacatataaattgtgccaagatatcttaggagggactttagagggtcaa
attaagttaaatgatgactcttatggtgttctgaaagatgctttggcatgtctagcgagt
gacgaaattaaattggtaagtttaaaatccaaatccactgatgaagtggaagatggagat
gaggatctggctggagcggtagctgcagtagctaaaaagaccattatttcacaggtggtt
aaaaagaacattattgaaaatattataccaattgtcattgctctgaagcacaaattagag
gagttgaaacatcctttgattgatgacctcatgacatacttgagggaaattatgaaggat
tataaggatgaagtgaaggagatgatctcagcggacaagagattagctcacgaaattcaa
tttgacctcaagcgttgggaggatcaacaacgaaggaacgaagcaagagacacggaagat
gatagtagtggcgaagatgaaaatgatggtgacttccatcctgaggctcagagaagaaga
ataggttcaagagaagtaaatgatgatcgtttgattcgacaagtacttaaaacggccatt
gtgaattttaggtcgcgacgacgtacattgaacgacgatatcgagaaagttgatagtggt
gtggtgcagtcctcacggagaacactaacacatgtggatttggctgatcgaaataaagat
agagaaacggtagccgaagttcctaaaaataattcagctccacaattgaatttaaataaa
gaacaagaacaatctgagtcactctgtaaggaatcttatggttctgaaagggattgtgct
tctgaattagaatcaaataaagagagaccaagtgtggaattatccacatccacaaataaa
tgcggagaagagactgaaacttcaaaacaaccatgtattcctaccgaaaaaagtgtagtc
tctgaatcctctaagagagtatcaaaagagacggcatctcaaagtttaagatcaagtcca
gaatctctttcttttcttgcttcaacaacaatagcgtcttctgctccaattggagttccc
aaattggggagagccgaagttagagattcttcttctactggagaggttttccttaatcca
caaaatgccaaaaaacgcttattcaactccacagggaattccatagtaacaccagttaaa
cgacttaaaataaatcgagccataagtactccttccgtgagtgtaagaaacattacattt
ttgaatgagagtgattgtagcgccattagcttcatttctgcaccatcccctaaaaatgtt
cctaatagtatatcaagtaaaaaaggggaggaggaagatgggtccataggttcctttaga
tatggacgtaacaaaacggatgcatttgatcatttagtggacggaaataagaaataa
DBGET
integrated database retrieval system
