Lepeophtheirus salmonis (salmon louse): 121132139
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Entry
121132139 CDS
T08214
Name
(RefSeq) vesicle-associated membrane protein 1 isoform X1
KO
K13504
vesicle-associated membrane protein 2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121132139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121132139
Membrane trafficking [BR:
lsm04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
121132139
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
121132139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
MCU
DivIVA
EMC3_TMCO1
Motif
Other DBs
NCBI-GeneID:
121132139
NCBI-ProteinID:
XP_040583501
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All DBs
Position
1:454237..457777
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AA seq
172 aa
AA seq
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MADTEKKEDKKPDRPLGPDGKPIPGPEQMRQIQAARKMGQQQAQVDEVINIMHTNVEQVL
ERDSKLGALEERADALQDGCAQFEKQAAAMKNKFWLENLKSMIAMGVVGVILLGLLYWKF
FASPPPPQYPPPYGYPPPPPPPPPPSVAPGPTESPAGDTGSSGDNSGADSLT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggcagacactgagaaaaaggaagataagaagccggatcgacctcttggtcctgatgga
aagccaatacctggtccggagcaaatgaggcaaatccaagctgcccgtaaaatgggtcaa
cagcaagctcaggtggatgaggtcattaacattatgcatactaatgttgagcaagtactg
gaacgtgatagcaaactgggtgcactggaagaacgagcggatgcattacaagatggatgt
gcacaatttgaaaaacaggctgcggcaatgaaaaataagttttggttagagaatttaaaa
tccatgatagccatgggcgtggtcggggtcatactcctagggctcctctattggaaattc
ttcgcctctcccccacctccacaatatcctccaccctatgggtatcctcctccaccaccg
ccaccaccacccccttcagtagcaccagggcctaccgagtctcctgctggagatactgga
tcatcaggggacaattcaggggcggattcattgacttaa
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