Lepeophtheirus salmonis (salmon louse): 121132384
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Entry
121132384 CDS
T08214
Symbol
RpL40
Name
(RefSeq) ubiquitin-ribosomal protein eL40 fusion protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03010
Ribosome
lsm04120
Ubiquitin mediated proteolysis
lsm04137
Mitophagy - animal
lsm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
121132384 (RpL40)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121132384 (RpL40)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121132384 (RpL40)
04137 Mitophagy - animal
121132384 (RpL40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
lsm03011
]
121132384 (RpL40)
04121 Ubiquitin system [BR:
lsm04121
]
121132384 (RpL40)
Ribosome [BR:
lsm03011
]
Ribosomal proteins
Eukaryotes
Large subunit
121132384 (RpL40)
Archaea
121132384 (RpL40)
Ubiquitin system [BR:
lsm04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
121132384 (RpL40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Dsc3_N
OTU1_UBXL
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
121132384
NCBI-ProteinID:
XP_040583712
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All DBs
Position
2:19849377..19853930
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AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGVIEPTLRLLAQKYNADKMICRKCYARLHPRATNCRKKKCGHTSN
IRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcttcgtcaaaactttgacgggcaagaccattacccttgaggtcgaaccttca
gataccatcgaaaatgtgaagactaagatccaggataaggaaggaattcctccagatcag
caacgtctcatctttgctggcaagcagctcgaagatggaaggactttgtctgattataac
attcagaaagagtctactcttcatctcgtccttcgattgagaggtggtgttattgaacca
acgctcaggcttttggctcaaaaatacaatgcagacaagatgatttgccgcaagtgctac
gctcgtcttcaccctagggcaactaactgccgcaagaagaagtgtggtcacacttccaac
atccgccccaaaaagaagctaaagtaa
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