Lepeophtheirus salmonis (salmon louse): 121132550
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Entry
121132550 CDS
T08214
Name
(RefSeq) uncharacterized protein
KO
K04729
myeloid differentiation primary response protein MyD88
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121132550
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Gene cluster
GFIT
Motif
Pfam:
TIR
TIR_2
Death
Adeno_Penton_B
Motif
Other DBs
NCBI-GeneID:
121132550
NCBI-ProteinID:
XP_040583912
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Position
1:complement(1031643..1042559)
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AA seq
862 aa
AA seq
DB search
MGSLENDEKLLRRIPLEAITARTLNKIANRLDQRKYLLTDDGQYFRDWRGLLEYADLERD
DKESILSKSEHFTTRIVILWSRKPGASVLGFVRALQKMDRYDIIQDHAESILKDCYSVQQ
STISQIGINQALTLQDLESLSRNEPLTTYDAIVLFGDSDLDLKFGMHVVERLEQSGKKVF
LYDRDLIIGAIEHEAAMEIVRARCKKVIALLTPTFHKNKISLFLTSYALHLQNDPDKMTR
IIPVIYSSQHLESEVMKNIDMYSKLMYDTSRPYFWKRLFFSFGDINVHSDLLQMSFPMPD
KFVQNLTLPEMSKVNVEPIQPTAVTPVMDPSVSRIESSASSLNESHESFSISSTTNLIFP
KTPSEEPSSSSIPQSRVKVKNKIKHNILKCLNKLSNYVPEEWGQEDAHVPNIGRNIQRLQ
EVVYGPRSDHQTRVNSASNNATQRVPGTVIEPIQEIVKTILHHVCRAPIIEPEQRNSGQN
AKIPTDLKDGNESLPRIELMDDALKPDHCEKSRGESHDPGQSQNDEYDEGLGSRGIEEGR
TLGEERHRHFASLQWIKIPLEMSAPENEENSTEDILIEDCEALDVDFNQARIGKIQHLEV
LTRVETLCLRWNLIKKIENLNTLTTLTELDLYDNQIPVIENLDPLVNLESLDLSFNRLRK
IEGISNLTKLRKLYLISNKISVIENLEALENLELLELGDNKIRKIENLESQKKLRQLYLG
KNKISKLENLDFPLLDLLSIQNNRIVKLENLDMIPRIDQLYISQNGIEVIEGLEGVSNLT
ILDIATNKIETLDNLDVLETLEELWCNTNQISDWKEVEKLNCHKDLKCVYLEHNPIYKSN
DYRRKVKLILPTVTQIDAALCR
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggggtccttagaaaatgatgagaaattgctgagaagaatacctcttgaggccatcacg
gctcgtacattgaacaaaattgcaaatcgtctggaccaaagaaaatatttgctaacagat
gatggacagtatttccgcgattggagaggtcttctagagtatgcggatcttgagcgagat
gacaaagagagtatattatccaaaagtgaacattttacgactcgaattgttatattatgg
agtcgaaaacctggagcatccgttctcgggtttgttcgtgcacttcaaaaaatggatcgc
tatgacatcattcaagatcacgctgagtccatattaaaggactgttattccgtccaacaa
tccactatttcgcaaataggaattaatcaggcattaacactccaagatctggagtcttta
agtcgtaacgaacccttgacgacctatgatgctattgttctttttggtgactcggatttg
gatttgaaatttggaatgcatgttgttgagcggttagaacaatccgggaagaaagtcttt
ctgtatgatagagatctaattatcggtgccatagagcatgaggctgctatggagattgta
cgagcaagatgtaaaaaagtgatagctcttcttacacctaccttccataaaaataaaatc
agtctctttttgacaagctacgcgcttcaccttcaaaatgatcctgacaaaatgacgcga
attattcctgtcatatatagttcacaacatctggaaagtgaagtgatgaaaaatattgac
atgtactcaaagttgatgtacgatacgtctagaccctacttttggaaaaggctctttttt
tcattcggtgatattaatgtgcattcagacctattacaaatgagcttcccaatgccggat
aagtttgttcaaaatcttacattaccagagatgagtaaggttaatgttgagcctattcaa
cccactgccgttacgcctgttatggatccatcagtttcaagaattgaatccagtgcaagc
agcctgaacgaatcccatgagtccttctctatatcgagtaccacaaaccttatattcccc
aaaactccatcagaagagccatcttcttcgagtattccgcaaagtcgtgtaaaagtaaaa
aataagattaagcacaatatcctcaagtgtcttaacaaactttcgaattatgtacctgaa
gagtggggccaggaagacgcacacgtcccgaatattggtaggaatattcaaagactgcaa
gaagtagtgtatggacccagaagtgatcatcagacccgggtaaacagtgcctccaacaat
gcgacccagagggtaccaggcacggtcatcgaaccaattcaggaaatcgtaaaaaccatt
cttcaccatgtgtgccgtgcaccgataattgaacctgagcaaagaaattcaggtcagaat
gcaaaaatacccacagacttaaaggatggaaatgagtcattaccaaggatcgaactcatg
gatgatgctctcaaaccggatcactgcgaaaagtcgagaggagaatcccacgatccaggc
cagagccagaatgatgaatacgatgagggacttggatcccgagggattgaggaggggaga
acccttggagaagagagacaccgtcattttgccagtctccaatggattaaaatccctttg
gagatgtctgcccccgagaatgaagaaaattccactgaggacatcctcattgaagattgc
gaagcccttgacgttgactttaatcaagcaaggataggaaagatccaacatttggaagtc
ctcacccgtgtggaaactctttgtcttcgatggaatctcatcaagaaaatcgagaattta
aacactttgacaactcttacagaattagatttatatgacaaccaaatccccgttattgaa
aacttggatcccctcgtcaatctcgagtccctggatctatcctttaatcgcctcaggaag
atagaaggcatttccaatttaaccaaactcagaaaactctaccttatctccaacaaaata
tcagtcatcgagaacttggaagctctagaaaacctagagctcctagaacttggtgataat
aaaatacgtaaaatcgagaatttagagagccaaaagaagcttcgccaattgtatcttggg
aaaaataaaatatcaaaattagaaaacttggattttccactccttgatcttctgagcata
caaaataatcgcattgtcaaattagaaaacttggacatgatcccacgcattgatcaactg
tacatttcccaaaatggtattgaggtgatcgaggggcttgaaggtgtgtccaacttaacg
attcttgatattgccaccaataaaattgagacattggataatttggatgttctcgagaca
cttgaggaattgtggtgcaacacgaatcagatatctgattggaaagaggtggaaaaactt
aattgccacaaggatcttaaatgtgtatacttggaacataatcccatttataagtcaaat
gattataggcgcaaagtcaaattaattcttccaacggtcactcagattgacgctgcacta
tgtcgttaa
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