Lepeophtheirus salmonis (salmon louse): 121132555
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Entry
121132555 CDS
T08214
Symbol
PCNA
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03030
DNA replication
lsm03410
Base excision repair
lsm03420
Nucleotide excision repair
lsm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121132555 (PCNA)
03410 Base excision repair
121132555 (PCNA)
03420 Nucleotide excision repair
121132555 (PCNA)
03430 Mismatch repair
121132555 (PCNA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsm03032
]
121132555 (PCNA)
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121132555 (PCNA)
DNA replication proteins [BR:
lsm03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
121132555 (PCNA)
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
121132555 (PCNA)
MMR (mismatch excision repair)
Other MMR factors
121132555 (PCNA)
TLS (translesion DNA synthesis) factors
Other TLS factors
121132555 (PCNA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Motif
Other DBs
NCBI-GeneID:
121132555
NCBI-ProteinID:
XP_040583916
LinkDB
All DBs
Position
2:complement(5443074..5444576)
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AA seq
261 aa
AA seq
DB search
MFEARLVQGNLLKKVLESLKDLLSEATWDAADSGITLQAMDNSHVSLVSVSLRAEGFDKF
RCDRQLSLGMNLTSMAKILKCASNNDVITLKAQDMSPDSVSFVFESPNGDRVSDYEMKLM
NLDAEHLGIPDTDYAAVVRMPSTEFSRVVKDLSQFGESLLICVTKEGVKFSSAGDIGVGN
IKLAQTASVDKEDEAVSVEMQEPVSLTFACNYLNMFTKATCLSPRVTLSMSPDVPLVVEY
AIGDIGHIRYYLAPKIEDDDS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggcccgtctcgttcaagggaatttattgaaaaaagtgttggaatccctcaag
gatctcctcagtgaggctacatgggatgcagcagattccgggatcactctacaagccatg
gacaactctcacgtgtccctcgtgagtgtttcccttcgtgccgaaggttttgacaaattc
cgatgtgaccgacaactaagtctgggtatgaatttgacttccatggccaagatcctcaaa
tgtgcctccaacaatgatgtcatcacacttaaagcccaagacatgagtccagactctgtg
tcattcgtgtttgaatctcccaatggggatcgtgtctccgactatgaaatgaaactgatg
aatctggatgcggagcatctcgggatccctgatacggactacgccgcagtcgttcgcatg
ccatccactgaattttcccgcgttgtcaaggatctctcacaatttggggagtcgctcctc
atctgtgtgaccaaagagggcgtcaaattctcttcagccggtgatattggagtaggaaac
atcaaacttgcgcagacagcctctgttgataaggaggacgaagcagtcagcgttgaaatg
caagagcccgtctctctcactttcgcctgtaactatctcaatatgtttaccaaagcaacc
tgtctttctcctcgtgtaacactctccatgagtcctgatgtacctctcgttgtagagtat
gctattggagatattgggcacattcgttactaccttgcacccaagatcgaagatgacgac
agctaa
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integrated database retrieval system
